 |
Job Description | P32695 | Confidence | 74.11% | Date | Thu Jan 5 11:50:18 GMT 2012 |
Rank | 460 | Aligned Residues | 116 |
% Identity | 15% | Template | d1trea_ |
SCOP info | TIM beta/alpha-barrel
| Triosephosphate isomerase (TIM)
| Triosephosphate isomerase (TIM)
|
Resolution | 2.60 |
|
 |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
|
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | C | V | K | A | M | R | D | V | V | S | I | P | V | T | V | K | T | R | I | G | . |
. |
. |
. |
. |
I | D | D | Q | D | S | Y | E | F | L | C | D | F | I | N | T | V | S | G | K | G | E | C | E | M | . |
. |
. |
F | I | I | H | A | R | K | A | W | L | S | G | L | S | P | K | E | N | R | E | I | P | P | L | D |
Query Conservation |   |
  |
|
|
|   |
|
|
|   |   |   |   |   |
|
|   |
|
|
|
|
|
| . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   | . | . | . |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |   |
|
Template Sequence |   |
E | L | I | A | K | K | F | A | V | L | K | E | Q | G | L | T | P | V | L | C | I | G | E | T | E | A | E | N | E | A | G | K | T | E | E | V | C | A | R | Q | I | D | A | V | L | K | T | Q | G | A | A | A | F | E | G | A | V | I | A | Y | E | P | V | W | A | I | G | T | G | K | S | A | T | P | A | Q | A | Q | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | T | T |
|  |  |  |  |
|
| G | G | G | S | S | S | S |
|
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
. | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | P | R | V | Y | Q | L | K | R | D | F | P | . |
. |
. |
. |
. |
H | L | T | M | S | I | N | G | G | I | K | S | L | E | E | A | K | A | H | L | Q | . |
. |
H | M | D | G | V | M | V | G | R | E | A | Y |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |
|
|
|
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   | . | . |   |   |
|   |
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
| . |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|
Template Sequence |   |
H | K | F | I | R | D | H | I | A | K | V | D | A | N | I | A | E | Q | V | I | I | Q | Y | G | G | S | V | . |
N | A | S | N | A | A | E | L | F | A | Q | P | D | I | D | G | A | L | V | G | G | A | S | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
| S |
|
| . |
| T | T | T |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  | S | G | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|