Job Description P32695 Confidence 100.00% Date Thu Jan 5 11:50:18 GMT 2012 Rank 20 Aligned Residues 227 % Identity 17% Template d1icpa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																	60	.
Predicted Secondary structure																			.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	V	H	W	S	G	R	F	S	V	A	P	M	L	D	W	.	.	.	.	.	.	.	T	D	R	H	C	R	Y	F	L	R	L	L	S	R	N	T	L	L	Y	T	E	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E
Query Conservation																			.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	F	E	L	C	H	R	V	V	L	A	P	L	T	R	Q	R	S	Y	G	Y	I	P	Q	P	H	A	I	L	H	Y	S	Q	R	S	T	N	G	G	L	L	I	G	E	A	T	V	I	S	E	T	G	I	G	Y	K	D	V	P	G	I	W	T	K	E	Q	V	E	A	W	K	P	I	V	D	A	V	H	A
Template Known Secondary structure		T	T				S		S												G	G	G	S												T			T	T											S	G	G	G			S	T	T			B		S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		62	.	.	.	.	.	.	.	70	.														.	.	.	.																																						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	H	P	V	A	L	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	G	I	F	F	C	Q	I	W	H	V	G	R	V	S	N	K	D	F	Q	P	N	G	E	D	P	I	S	C	T	D	R	G	L	T	P	Q	I	M	S	N	G	I	D	I	A	H	F	T	R	P	R	R	L	T	T	D	E	I	P	Q	I	V	N	E	F	R	V	A	A	R	N	A	I	E	A	G	F	D
Template Known Secondary structure		T	T											T	T	S	S		T	T	T	S	G	G	G						S	S	S									T	T	S	S													T	T	T																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		92	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.
Query Sequence		E	I	N	L	N	V	G	C	.	.	.	.	.	.	.	.	.	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	.	.	.	.	.	.	.	Y	E	F	L	C	D	F
Query Conservation										.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																																					.													.	.	.	.	.	.	.
Template Conservation																																																							.
Template Sequence		G	V	E	I	H	G	A	H	G	Y	L	I	D	Q	F	M	K	D	Q	V	N	D	R	S	D	K	Y	G	G	S	L	E	N	R	C	R	F	A	L	E	I	V	E	A	V	A	N	E	I	G	S	D	R	.	V	G	I	R	I	S	P	F	A	H	Y	N	E	A	G	D	T	N	P	T	A	L	G	L	Y	M
Template Known Secondary structure									T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G	.							T	T			T	T	T				S
Template Predicted Secondary structure																																																							.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	.	.	M	D	G	V	M	V	G
Query Conservation																																																																									.	.
Alig confidence						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.											.												.	.
Template Conservation						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.											.
Template Sequence		V	E	S	L	.	N	K	Y	D	L	A	Y	C	H	V	V	E	P	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	C	T	E	S	L	V	P	M	R	K	A	Y	.	K	G	T	F	I	V	A	G	G	Y	.	D	R	E	D	G	N	R	A	L	I	E	D	R	A	D	L	V	A	Y	G
Template Known Secondary structure						.	G	G	G			S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.							S								.		S						S	S		.											T	T	S		S					S
Template Predicted Secondary structure						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.											.
Template SS confidence
		262	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280															.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	Y	Q	N	P	G	I	L	A	A	V	D	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	F	I	S	N	P	D	L	P	K	R	F	E	L	N
Template Known Secondary structure								T	T								T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions