Return to main results Retrieve Phyre Job Id

Job DescriptionP32695
Confidence80.75%DateThu Jan 5 11:50:18 GMT 2012
Rank423Aligned Residues211
% Identity11%Templatec3qfeB_
PDB info PDB header:lyaseChain: B: PDB Molecule:putative dihydrodipicolinate synthase family protein; PDBTitle: crystal structures of a putative dihydrodipicolinate synthase family2 protein from coccidioides immitis
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20... ......30... ......40... ......50.........60.......
Predicted Secondary structure 
















..........





......







Query SS confidence 



















. . . . . . .









. . .









. . . . . .























Query Sequence  KTDVHWSGRFSVAPMLDWTD. . . . . . . RHCRYFLRLL. . . SRNTLLYTEM. . . . . . VTTGAIIHGKGDYLAYSEEEHPVA
Query Conservation     
 
 


 



 



.......  

 
 
  ...
   
  


......
                    
  
Alig confidence 



















.......









...









......























Template Conservation 
       

  
  


   

 

       
  
   

 

 
 
 


   

  

        
       

Template Sequence  MVPRVPQPGIWCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIM
Template Known Secondary structure 


SS

S



TTTT
TTT
ST
GGGTGGGS

TTS
Template Predicted Secondary structure 





































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   68.70.........80.........90.........100.........110.........120.........130.........140.......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  LQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQD
Query Conservation 


 
 

     

      
 
 



 


         
  
        


 


     

 





 
   
Alig confidence 





























..


............
































Template Conservation   

   
    
  
  
   


 
 
  ..
  ............     
      

     

 


 
      
Template Sequence  AGVGAHSTRQVLEHINDASVAGANYVLVLP. . PAY. . . . . . . . . . . . TTPPVIKSFFDDVSCQSPLPVVIYNFPIDLDSD
Template Known Secondary structure 


SST
S

..


............


SS






Template Predicted Secondary structure 









..


............











Template SS confidence 















































































   81........90.........100.........110 ... ......120.........130.........140......
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  SYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHM
Query Conservation             
    

  
 

 
     
                
         



 

 
 
  

   
   
Alig confidence 






......












..................





















.












Template Conservation      
  ......  
 
 


 
  ..................       
          
  
. 
         
 
Template Sequence  MITTIAR. . . . . . KNPNVVGVKLTCA. . . . . . . . . . . . . . . . . . SVGKITRLAATLPPAAFSVFGG. QSDFLIGGLSVGS
Template Known Secondary structure  T......T
TTSS
..................
S
TTT

.
GGGTT
Template Predicted Secondary structure  ......






..................






.


Template SS confidence 















































































   156...160.. .......170..... ....180.........190....... ..200.........210
 
   228.230.........240.........250....
Predicted Secondary structure 




Query SS confidence 


























Query Sequence  DGVMVGREAYQNPGILAAVDREIFGSS
Query Conservation 
 




  
 

 

  
        
Alig confidence 









.















Template Conservation   
 

   
 . 
            

Template Sequence  AGCIAAFANV. FPKTVSKIYELYKAGK
Template Known Secondary structure 

GGGGT.
T
Template Predicted Secondary structure 
.


Template SS confidence 


























   211........220 .........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions