|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | |
|
|
. | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | D | V | H | W | S | G | R | F | S | V | A | P | M | L | D | W | T | D | . |
. |
. |
. |
. |
. |
. |
R | H | C | R | Y | F | L | R | L | L | . |
. |
. |
S | R | N | T | L | L | Y | T | E | M | . |
. |
. |
. |
. |
. |
V | T | T | G | A | I | I | H | G | K | G | D | Y | L | A | Y | S | E | E | E | H | P | V | A |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|
|   |
|
|
|
|   |
|
|
|
| . | . | . | . | . | . | . |   |   |
|
|   |
|   |
|   |   | . | . | . |
|   |   |   |
|   |   |
|
|
| . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
Template Sequence |   |
M | V | P | R | V | P | Q | P | G | I | W | C | P | A | V | T | F | F | D | S | K | T | D | T | L | D | L | A | S | Q | E | R | Y | Y | A | Y | L | A | R | S | G | L | T | G | L | V | I | L | G | T | N | A | E | A | F | L | L | T | R | E | E | R | A | Q | L | I | A | T | A | R | K | A | V | G | P | D | F | P | I | M |
Template Known Secondary structure |   |
|
|
| S | S |
|
| S |  |  |  |  |  |
|
|
|
|  |  | T | T | T | T |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  | T |
| G | G | G | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | L | G | G | S | D | P | A | A | L | A | Q | C | A | K | L | A | E | A | R | G | Y | D | E | I | N | L | N | V | G | C | P | S | D | R | V | Q | N | G | M | F | G | A | C | L | M | G | N | A | Q | L | V | A | D | C | V | K | A | M | R | D | V | V | S | I | P | V | T | V | K | T | R | I | G | I | D | D | Q | D |
Query Conservation |   |
|
|
|   |
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
|   |   | . | . |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
A | G | V | G | A | H | S | T | R | Q | V | L | E | H | I | N | D | A | S | V | A | G | A | N | Y | V | L | V | L | P | . |
. |
P | A | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | T | P | P | V | I | K | S | F | F | D | D | V | S | C | Q | S | P | L | P | V | V | I | Y | N | F | P | I | D | L | D | S | D |
Template Known Secondary structure |   |
 |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
| . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
|
|
|
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
. | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Y | E | F | L | C | D | F | I | N | T | V | S | G | K | G | E | C | E | M | F | I | I | H | A | R | K | A | W | L | S | G | L | S | P | K | E | N | R | E | I | P | P | L | D | Y | P | R | V | Y | Q | L | K | R | D | F | P | H | L | T | M | S | I | N | G | G | I | K | S | L | E | E | A | K | A | H | L | Q | H | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   | . | . | . | . | . | . |   |   |
|   |
|   |
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
| . |   |
|   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
M | I | T | T | I | A | R | . |
. |
. |
. |
. |
. |
K | N | P | N | V | V | G | V | K | L | T | C | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | V | G | K | I | T | R | L | A | A | T | L | P | P | A | A | F | S | V | F | G | G | . |
Q | S | D | F | L | I | G | G | L | S | V | G | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | . | . | . | . | . | . | T |
| T | T |  |  |  |  |  |  | S | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | S |
| T | T | T |
|  |  |  |  |
| . |
| G | G | G |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | V | M | V | G | R | E | A | Y | Q | N | P | G | I | L | A | A | V | D | R | E | I | F | G | S | S |
Query Conservation |   |
|   |
|
|
|
|
|   |   |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |   |
|   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
A | G | C | I | A | A | F | A | N | V | . |
F | P | K | T | V | S | K | I | Y | E | L | Y | K | A | G | K |
Template Known Secondary structure |   |
|  |  |  |
| G | G | G | G | T | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |