Job Description P32695 Confidence 91.37% Date Thu Jan 5 11:50:18 GMT 2012 Rank 344 Aligned Residues 241 % Identity 15% Template c3pueA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of the complex of dhydrodipicolinate synthase from2 acinetobacter baumannii with lysine at 2.6a resolution Resolution 2.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.	.	.	.											.	.	.										.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.											.	.	.										.	.	.	.	.	.
Query Sequence		H	W	S	G	R	F	S	V	A	P	M	L	D	W	T	D	.	.	.	.	.	.	R	H	C	R	Y	F	L	R	L	L	.	.	.	S	R	N	T	L	L	Y	T	E	.	.	.	.	.	.	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	G	G
Query Conservation																		.	.	.	.	.	.											.	.	.										.	.	.	.	.	.
Alig confidence						.												.	.	.	.	.	.											.	.	.										.	.	.	.	.	.
Template Conservation						.
Template Sequence		T	I	Q	G	.	S	I	V	A	I	V	T	P	M	L	K	D	G	G	V	D	W	K	S	L	E	K	L	V	E	W	H	I	E	Q	G	T	N	S	I	V	A	V	G	T	T	G	E	A	S	T	L	S	M	E	E	H	T	Q	V	I	K	E	I	I	R	V	A	N	K	R	I	P	I	I	A	G	T	G	A
Template Known Secondary structure						.									B		T	T	S		B																T							S	S	G	G	G	T	G	G	G	S																		S	S	S
Template Predicted Secondary structure						.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	T	R	E	A	I	E	L	T	K	A	A	K	D	L	G	A	D	A	A	L	L	V	T	P	Y	Y	N	K	P	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	E	G	L	Y	Q	H	Y	K	A	I	A	E	A	V	E	L	P	L	I	L	Y	N	V	P	G	R	T	G	V	D	L	S	N	D	T
Template Known Secondary structure		S	S														T	T		S									S	S			.	.	.	.	.	.	.	.	.	.	.	.																		S												S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110													.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	M	D	G	V	M	V
Query Conservation
Alig confidence				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		A	V	.	.	.	R	L	A	E	I	P	N	I	V	G	I	K	D	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	P	R	G	K	A	L	I	D	A	L	N	G	K	M	A	V	Y	S	G	.	.	D	D	E	T	A	W	E	L	M	L	L	G	A	D	G	N	I	S
Template Known Secondary structure				.	.	.			T	T	S	T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	T	T	S						.	.											T	T
Template Predicted Secondary structure				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		148	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	A	Y	Q	N	P	G	I	L	A	A	V	D	R	E	I	F	G	S	S	D	T	D	A	D	P	V	A	V	V	R	A	M	Y	P	Y	I	E	R	E	L	S	Q	G	T	Y	L	G	H	I	T	R	H	M
Query Conservation
Alig confidence								.																.	.	.
Template Conservation								.																.	.	.
Template Sequence		V	T	A	N	I	A	.	P	K	A	M	S	E	V	C	A	V	A	I	A	K	D	.	.	.	E	Q	Q	A	K	T	L	N	N	K	I	A	N	L	H	N	I	L	F	C	E	S	N	P	I	P	V	K	W	A	L
Template Known Secondary structure		S	G	G	G	T		.													T	T		.	.	.										T	T							T	T	S	S	S	T	T
Template Predicted Secondary structure								.																.	.	.
Template SS confidence
		205	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions