Job Description P32695 Confidence 93.73% Date Thu Jan 5 11:50:18 GMT 2012 Rank 315 Aligned Residues 227 % Identity 12% Template c3noeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa Resolution 2.95 Å

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		25	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure											.	.	.											.	.	.	.	.	.
Query SS confidence											.	.	.											.	.	.	.	.	.
Query Sequence		H	C	R	Y	F	L	R	L	L	.	.	.	S	R	N	T	L	L	Y	T	E	M	.	.	.	.	.	.	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	G	G	S	D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L
Query Conservation											.	.	.											.	.	.	.	.	.
Alig confidence											.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	A	K	L	V	D	F	H	L	Q	D	G	T	N	A	I	V	A	V	G	T	T	G	E	S	A	T	L	D	V	E	E	H	I	Q	V	V	R	R	V	V	D	Q	V	K	G	R	I	P	V	I	A	G	T	G	A	N	S	T	R	E	A	V	A	L	T	E	A	A	K	S	G	G	A	D	A	C	L	L
Template Known Secondary structure														T		S					S	S	T	T	T	T	G	G	G																		T	T	S	S									S	S													T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.																								.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	T	P	Y	Y	N	K	P	T	Q	E	G	M	Y	Q	H	F	R	H	I	A	E	A	V	A	I	P	Q	I	L	Y	N	V	P	G	R	T	S	C	D	.	.	.	M	L	P	E	T	V	E	R	L	S	K	V	P	N	I	I	G	I	K	E	A	T	G	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.					S	S																		S		S												S			.	.	.											T	S	T	T								S		.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.																								.	.
Template SS confidence
														103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	M	D	G	V	M	V	G	R	E	A	Y	Q	N	P	G	I	L	A	A	V	D	R	E	I	F	G	S	S	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	Q	R	A	K	E	V	I	E	R	V	G	K	D	F	L	V	Y	S	G	D	D	A	T	A	V	E	L	.	.	M	L	L	G	G	K	G	N	I	S	V	T	A	N	V	A	P	R	A	M	S	D	L	C	A	A	A	M	R	G	D	A	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S		T	T	S							T	T	T					.	.			T	T							S	G	G	G	T															T			.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																																	.
Template SS confidence
																		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	A	D	P	V	A	V	V	R	A	M	Y	P	Y	I	E	R	E	L	S	Q	G	T	Y	L	G	H	I	T	R	H	M	L	G
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	A	A	R	A	I	N	D	R	L	M	P	L	H	K	A	L	F	I	E	S	N	P	I	P	V	K	W	A	L	H	E
Template Known Secondary structure		.	.	.																	T	T	S	S	S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions