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Job DescriptionP32695
Confidence98.24%DateThu Jan 5 11:50:18 GMT 2012
Rank122Aligned Residues140
% Identity21%Templatec3ng3A_
PDB info PDB header:lyaseChain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  LGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSY
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Template Sequence  SGKHVSAVKAHEAALAVASGAAEIDM. . . VI. . . . . . . DVGAALAGDLDGVRADIAAVRGAVG. GAVLKVIV. . . . . ESS
Template Known Secondary structure  T

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   68.70.........80.........90... .. ....100.........110.........120 ........ .130.
 
   150.........160.........170.........180.........190.........200..... ....210.........220.
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Query Sequence  . . . . . . . EFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPH. LTMSINGGIKSLEEAK
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Template Sequence  ALLALADEHTLVRVCRAAEDAGADFVKTSTGF. . . . . . . . . . . HPSGGASVRAVALMAEAVGGRLGVKASGGIRTAADAL
Template Known Secondary structure  S
TT
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   132.......140.........150.........160... ......170.........180.........190.........200
 
   222... ....230......
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Query Sequence  AHLQ. HMDGVMVGREA
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Template Sequence  AMLDAGATRLGLSGTR
Template Known Secondary structure  TT
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   201........210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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