Job Description P32695 Confidence 90.30% Date Thu Jan 5 11:50:18 GMT 2012 Rank 353 Aligned Residues 155 % Identity 12% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		D	L	P	A	L	G	R	S	I	E	R	L	I	D	G	G	V	H	A	I	A	P	L	.	.	.	.	.	.	.	.	.	.	G	S	T	G	E	G	A	Y	L	S	D	P	E	W	D	E	V	V	D	F	T	L	K	T	V	A	H	R	V	P	T	I	V	S	V	S	.	.	.	D	L	T	T	A	K	T	V
Template Known Secondary structure																T	T		S					S	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T	G	G	G	S																	T	T	S	S		B						.	.	.		S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.											.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	.	.	.	.	.	.	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	M
Query Conservation																																																										.	.	.	.	.	.
Alig confidence								.																.	.	.	.	.	.	.	.	.																				.						.	.	.	.	.	.
Template Conservation								.																.	.	.	.	.	.	.	.	.																				.
Template Sequence		R	R	A	Q	F	A	.	E	S	L	G	A	E	A	V	X	V	L	P	I	S	Y	.	.	.	.	.	.	.	.	.	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	.	G	V	P	V	X	L	Y	N	N	P	G	T	S	G	I	D	X	S	V	E	L	I	L	R	I	V	R	E	V
Template Known Secondary structure								.			T	T		S									S	.	.	.	.	.	.	.	.	.	S																			.	S	S												S															S
Template Predicted Secondary structure								.																.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	M	V	G	R	E	A	Y	Q	N	P	G	I	L	A	A	V	D	R	E	I	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	V	T	X	V	K	E	S	T	G	D	I	Q	R	X	H	K	L	R	L	L	G	E	G
Template Known Secondary structure		T	T								S	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions