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Job DescriptionP32695
Confidence69.91%DateThu Jan 5 11:50:18 GMT 2012
Rank477Aligned Residues135
% Identity13%Templatec3n2xB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  DPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLC
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Template Sequence  DKPGTAALIDDLIKAGVDGLFF. . . . . . . . . . LGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG. . . GTNARETI
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   32.......40.........50... ......60.........70.........80.........90 ........
 
   154.....160.........170.........180.........190.........200.........210. ........220.......
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Query Sequence  DFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSIN. . . . . . GGIKSLEEAKAHLQHM
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Template Sequence  ELSQHAQQA. GADGIVVINPYY. . . . . . . . . WKVSEANLIRYFEQVADSV. TLPVMLYNFPALTGQDLTPALVKTLADSR
Template Known Secondary structure  .T
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   99100....... ..110......... 120.........130........ .140.........150.........160.......
 
   228.230..
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Query Sequence  DGVMV
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Template Sequence  SNIIG
Template Known Secondary structure  TT
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   168.170..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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