Job Description P32695 Confidence 100.00% Date Thu Jan 5 11:50:18 GMT 2012 Rank 5 Aligned Residues 242 % Identity 21% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.										.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.										.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	V	H	W	S	G	R	F	S	V	A	P	M	L	D	.	.	.	.	.	.	.	.	W	T	D	R	H	C	R	Y	F	.	L	R	L	L	S	R	N	T	L	L	Y	T	E	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																		.	.	.	.	.	.	.	.										.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.										.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	I	T	I	K	N	R	I	M	M	S	P	M	C	M	Y	S	A	S	T	D	G	M	P	N	D	W	H	I	V	H	Y	A	T	R	A	I	G	G	V	G	L	I	M	Q	E	A	T	A	V	E	S	R	G	R	I	T	D	H	D	L	G	I	W	N	D	E	Q	V	K	E	L	K	K	I	V	D	I	C
Template Known Secondary structure		T	T				S	S	S											S		T	T																	T	T		S									S	S	G	G	G		S	S	T	T	S		B		S	S	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																																					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		S	E	E	E	H	P	V	A	L	Q	L	G	G	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation
Template Sequence		K	A	N	G	A	V	M	G	I	Q	L	A	H	A	G	R	K	C	N	I	S	Y	E	D	V	V	G	P	S	P	I	K	A	G	D	R	Y	K	L	P	R	E	L	S	V	E	E	I	K	S	I	V	K	A	F	G	E	A	A	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I
Template Known Secondary structure				T	T											G	G	G				T	T	S					S	S	S			S	S	T	T	S																													T		S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
						99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.																																																		.	.	.	.
Query SS confidence		.	.	.	.																																																		.	.	.	.
Query Sequence		.	.	.	.	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	.	.	.	.	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I
Query Conservation		.	.	.	.																																																		.	.	.	.
Alig confidence		.	.	.	.																																																		.	.	.	.													.	.
Template Conservation																																																																							.	.
Template Sequence		H	E	F	L	S	P	L	S	N	K	R	K	D	E	Y	G	N	S	I	E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y	M	E	G	G	I	N	I	D	M	M	V	E	Y	I	N	M	I	.	.	K	D	K	V	D	L	I	D	V
Template Known Secondary structure							T	T	T					S	T	T	S	S	S					T													T	S		T	T	S											S	S	T	T	S														.	.	T	T	T		S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	.	.	M	D	G	V	M	V	G	R	E	A	Y	Q	N	P	G	I	L	A	A	V	D	R
Query Conservation																																																										.	.
Alig confidence					.	.	.	.	.																										.																							.	.
Template Conservation					.	.	.	.	.																										.
Template Sequence		S	S	G	.	.	.	.	.	G	L	L	N	V	D	I	N	L	Y	P	G	Y	Q	V	K	Y	A	E	T	I	K	K	R	C	.	N	I	K	T	S	A	V	G	L	I	T	T	Q	E	L	A	E	E	I	L	S	N	E	R	A	D	L	V	A	L	G	R	E	L	L	R	N	P	Y	W	V	L	H	T	Y	T
Template Known Secondary structure					.	.	.	.	.		S	S								T	T	T	T												.	T							S	S													T	T	S		S					S							T	T							S
Template Predicted Secondary structure					.	.	.	.	.																										.
Template SS confidence
		249	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		249	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	F	G	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	E	D	W	P
Template Known Secondary structure		S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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