Return to main results Retrieve Phyre Job Id

Job DescriptionP32695
Confidence97.86%DateThu Jan 5 11:50:18 GMT 2012
Rank155Aligned Residues157
% Identity15%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90..... ....100.........110.........120.........130 ....
Predicted Secondary structure 






.........















.



Query SS confidence 






























. . . . . . . . .


































.



Query Sequence  PVALQLGGSDPAALAQCAKLAEARGYDEINL. . . . . . . . . NVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDV. VSIP
Query Conservation 
  


 
 

     

      
 
 


.........
 


         
  
        


 


  .   
Alig confidence 






























.........







....................






.



Template Conservation 
  
 
   
     
 
      
   


 
 

 
      
   ....................
  
        
Template Sequence  QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMV. . . . . . . . . . . . . . . . . . . . LKALRDYGITAG
Template Known Secondary structure  BGGGS
GGGTT


BSSSSS
B


....................T

S
Template Predicted Secondary structure 

















....................




Template SS confidence 















































































   5....10.........20.........30.........40.........50.. .......60....
 
   135....140.........150.........160.........170...
Predicted Secondary structure 















.........................................
Query SS confidence 






































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  VTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHAR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
 





 
              
    

  
 

 
.........................................
Alig confidence 






.....












....









.........................................
Template Conservation        
.....      
      ....


 
                    
    
 
   
              
Template Sequence  MDVHLMV. . . . . KPVDALIESFAKA. . . . GATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDR
Template Known Secondary structure 
.....SS
....T
S
GGG
S
TTTS
TT

SGGGTTTGGG
S
Template Predicted Secondary structure 




.....


....

















Template SS confidence 















































































   65....70. ........80.... .....90.........100.........110.........120.........130.....
 
   174.....180.........190.........200.........210.........220..... ....230.........240.........250
Predicted Secondary structure  .




























.

Query SS confidence  .



















































.
























Query Sequence  . KAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQ. HMDGVMVGREAYQNPGILAAVDREI
Query Conservation  .     
                
         



 

 
 
  

   
 .  
 




  
 

 

  
    
Alig confidence  .



















































.
























Template Conservation 
       
           
  
            
   


           


 






    

   
  
 
Template Sequence  VLIMSVNPGFQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMR
Template Known Secondary structure 
S
TT




TTTS

SS

TTTTTT

STSS
Template Predicted Secondary structure 


























Template SS confidence 














































































   136...140.........150.........160.........170.........180.........190.........200.........210....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions