Job Description P32695 Confidence 100.00% Date Thu Jan 5 11:50:18 GMT 2012 Rank 3 Aligned Residues 249 % Identity 20% Template c3hf3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:chromate reductase; PDBTitle: old yellow enzyme from thermus scotoductus sa-01 Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	V	H	W	S	G	R	F	S	V	A	P	M	L	D	.	.	.	.	.	.	.	.	W	T	D	R	H	C	R	Y	F	.	L	R	L	L	S	R	N	T	L	L	Y	T	E	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	L	R	L	K	N	R	L	A	M	S	P	M	C	Q	Y	S	A	T	L	E	G	E	V	T	D	W	H	L	L	H	Y	P	T	R	A	L	G	G	V	G	L	I	L	V	E	A	T	A	V	E	P	L	G	R	I	S	P	Y	D	L	G	I	W	S	E	D	H	L	P	G	L	K	E	L	A	R	R	I
Template Known Secondary structure		T	T				S	S	S											S		T	T																	T	T		S									S	S	G	G	G		S	S	T	T	S				S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																																														.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	E	E	H	P	V	A	L	Q	L	G	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	A	G	A	V	P	G	I	Q	L	A	H	A	G	R	K	A	G	T	A	R	P	W	E	G	G	K	P	L	G	W	R	V	V	G	P	S	P	I	P	F	D	E	G	Y	P	V	P	E	P	L	D	E	A	G	M	E	R	I	L	Q	A	F	V	E	G	A	R	R	A	L	R	A	G	F	Q	V	I	E
Template Known Secondary structure				T	T	S										G	G	G			B			G	G	G	T			B								S	S	S			S	S	T	T	S																												T	T		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		95	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Query Sequence		L	N	V	G	.	.	.	.	.	.	.	.	.	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	.	.	.	.	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G
Query Conservation						.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Conservation
Template Sequence		L	H	M	A	H	G	Y	L	L	S	S	F	L	S	P	L	S	N	Q	R	T	D	A	Y	G	G	S	L	E	N	R	M	R	F	P	L	Q	V	A	Q	A	V	R	E	V	V	P	R	E	L	P	L	F	V	R	V	S	A	T	D	W	G	E	G	G	W	S	L	E	D	T	L	A	F	A	R	R	L	K	E
Template Known Secondary structure						T	T	S								T	T	T					S	T	T	S	S	S																	T	T	S		T	T	S								S				S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	.	.	M	D	G	V	M	V	G	R	E	A	Y	Q	N
Query Conservation																																																																			.	.
Alig confidence			.																									.	.	.	.													.																							.	.
Template Conservation			.																									.	.	.	.													.
Template Sequence		L	.	G	V	D	L	L	D	C	S	S	G	G	V	V	L	R	V	R	I	P	L	A	P	G	F	.	.	.	.	Q	V	P	F	A	D	A	V	R	K	R	V	.	G	L	R	T	G	A	V	G	L	I	T	T	P	E	Q	A	E	T	L	L	Q	A	G	S	A	D	L	V	L	L	G	R	V	L	L	R	D
Template Known Secondary structure			.	T											S		S	S	S						T	T	T	.	.	.	.	T												.								S	S													T	T	S		S					S
Template Predicted Secondary structure			.																									.	.	.	.													.
Template SS confidence
		251		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	I	L	A	A	V	D	R	E	I	F	G	S	S	D	T	D	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	F	P	L	R	A	A	K	A	L	G	V	A	P	E	V	P	P	Q
Template Known Secondary structure		T	T									T	T							G	G
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions