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Job DescriptionP32695
Confidence100.00%DateThu Jan 5 11:50:18 GMT 2012
Rank4Aligned Residues246
% Identity22%Templatec3gr7A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20 ......... 30.........40.........50.........60.
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Query Sequence  TDVHWSGRFSVAPMLD. . . . . . . . . WTDRHCRYF. LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSE. . . . . . . . . . . . .
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Template Sequence  RGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGL
Template Known Secondary structure  TTSSS







TTSSS


TT
SSSGGG
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   62.......70... ......80.........90........
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Query Sequence  . . . EEHPVALQLGGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DPAALAQCAKLAEARGYDEINLNVG. . . . .
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Template Sequence  VKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLI
Template Known Secondary structure  TT


GGG

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T
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TT
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   99100.........110.........120.........130.........140....... ..150.........160.........170..
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Query Sequence  . . . . CPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQD. . SYEFLCDFINTVSGKGECEMFIIHA
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Template Sequence  NEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQ. GVDLVDVSS
Template Known Secondary structure 
TTT



STTSSS

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STTS

GGGT.T


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   172.......180.........190.........200.........210.........220.........230.........240. ........250
 
   173......180.........190.........200.........210.........220...... ...230.........240.........250
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Query Sequence  RKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH. . MDGVMVGREAYQNPGILAAVDREI
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Template Sequence  GAI. . . . . VPARMNVYPGYQVPFAELIRREA. DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAREL
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TTTTT.T

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   251.. ......260.........270...... ...280.........290.........300.........310.........320....
 
   251......
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Query Sequence  FGSSDTD
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Template Sequence  GAKISAP
Template Known Secondary structure  T





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   325....330.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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