Job Description P32695 Confidence 97.14% Date Thu Jan 5 11:50:18 GMT 2012 Rank 213 Aligned Residues 174 % Identity 9% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	D	W	T	D	R	H	C	R	Y	F	L	R	L	L	S	R	N	T	L	L	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	G	G	S	D	P	A	A	L	A	Q	C	A	K
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	G	A	I	T	A	Y	A	A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R
Template Known Secondary structure						S	S										T	T		S																S		S	S	S																				S							T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G
Query Conservation
Alig confidence																		.																																																															.
Template Conservation																		.																																																															.
Template Sequence		S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	.	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	.
Template Known Secondary structure						T	T		S							B		.					T	T							B																		S		T	T	S																												.
Template Predicted Secondary structure																		.																																																															.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		G	A	D	M	I	F	P	E	A	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	D	Y	R	R	F	K	E	A	V	K	.	V	P	I	L	A	N
Template Known Secondary structure		T		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													.	S		B
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.																		.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions