Job Description P32695 Confidence 92.96% Date Thu Jan 5 11:50:18 GMT 2012 Rank 330 Aligned Residues 243 % Identity 14% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.	.	.	.											.	.	.											.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.											.	.	.											.	.	.	.	.	.
Query Sequence		H	W	S	G	R	F	S	V	A	P	M	L	D	W	T	D	.	.	.	.	.	.	R	H	C	R	Y	F	L	R	L	L	.	.	.	S	R	N	T	L	L	Y	T	E	M	.	.	.	.	.	.	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	G	G
Query Conservation																		.	.	.	.	.	.											.	.	.											.	.	.	.	.	.
Alig confidence						.												.	.	.	.	.	.											.	.	.											.	.	.	.	.	.
Template Conservation						.
Template Sequence		D	F	H	G	.	V	F	P	Y	L	V	S	P	V	D	A	E	G	R	V	R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	T	P	L	G	S	T	G	E	F	A	Y	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V	V	A	G	V	A	S
Template Known Secondary structure						.				B					B		T	T	S		B															T	T		S		B	B	T	T	S	G	G	G	T	G	G	G																		T	T	S	S		B
Template Predicted Secondary structure						.
Template SS confidence
		4	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Sequence		T	S	V	A	D	A	V	A	Q	A	K	L	Y	E	K	L	G	A	D	G	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	.	.	.	L	T
Template Known Secondary structure		S	S															T		S					.	.	.	.	.	.	.	.	.	.	.	.					S	S																			S	S								T	T	T		S	S		.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.													.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	M	D	G	V	M	V
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		L	D	V	I	A	R	L	A	E	H	P	R	I	R	Y	I	K	D	A	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	G	R	L	L	S	I	I	N	R	C	G	D	A	L	Q	V	F	S	A	S	A	H	I	P	.	.	A	A	V	M	L	I	G	G	V	G	W	M	A
Template Known Secondary structure										T	S	T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													G	G	G	S						T	T	S			.	.						T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	A	Y	Q	N	P	G	I	L	A	A	V	D	R	E	I	F	G	S	S	D	T	D	A	D	P	V	A	V	V	R	A	M	Y	P	Y	I	E	R	E	L	S	Q	G	T	Y	L	G	H	I	T	R	H	M	L	G
Query Conservation
Alig confidence																								.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		G	P	A	C	I	A	P	R	Q	S	V	A	L	Y	E	L	C	K	A	Q	R	W	.	.	.	.	D	E	A	L	M	L	Q	R	K	L	W	R	V	N	E	A	F	A	K	F	N	L	A	A	C	I	K	A	G	L	A	L
Template Known Secondary structure		G	G	G	G	T														T	T			.	.	.	.											T							T	T	S
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions