Job Description P32695 Confidence 97.71% Date Thu Jan 5 11:50:18 GMT 2012 Rank 165 Aligned Residues 143 % Identity 15% Template c3dfyJ_ PDB info PDB header:isomerase Chain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	G	G	S	D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		Y	L	L	G	G	K	R	D	E	I	E	T	D	K	T	V	G	I	D	T	V	E	N	R	V	K	E	A	K	K	I	F	E	E	G	F	R	V	I	K	I	K	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	K	E	D	I	E	A	V	E	E	I	A	K	V	T	R	G	.
Template Known Secondary structure				T	T				S				B						S																T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	S	T	T	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I
Query Conservation
Alig confidence		.	.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation		.	.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		.	.	A	K	Y	I	V	D	A	N	M	G	Y	T	Q	K	E	A	V	E	F	A	R	A	V	Y	Q	K	.	G	I	D	I	A	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	P	V	R	R	E	D	I	E	G	L	K	F	V	R	F	H	S	.	P	F	P	V	A	A	D	E	S	A
Template Known Secondary structure		.	.								T	T		S															T	.	T				S			.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T													.	S	S					S	T	T
Template Predicted Secondary structure		.	.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
				183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.															.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		K	S	L	E	E	A	K	A	H	L	Q	H	.	.	M	D	G	V	M	V
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		R	T	K	F	D	V	M	R	L	V	K	E	E	A	V	D	Y	V	N	I
Template Known Secondary structure		S	S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions