Job Description P32695 Confidence 98.00% Date Thu Jan 5 11:50:18 GMT 2012 Rank 141 Aligned Residues 136 % Identity 14% Template c3dfhC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase / muconate2 lactonizing enzyme from vibrionales bacterium swat-3 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	A	L	Q	L	G	G	S	D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		P	V	Y	T	H	A	T	S	D	T	M	E	G	I	Y	D	L	V	E	G	F	L	E	K	G	Y	K	H	I	R	C	Q	L	G	F	D	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	M	D	N	T	L	T	M	F	K	S	L	R	E	K	Y	G	N	Q	F	H	I	L	H	D	V	H	E	.
Template Known Secondary structure										S	S														T	T														.	.	.	.	.	.	.	.	.	.	.	.																		T	T	S	S							T	T	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.													.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L
Query Conservation
Alig confidence		.															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation		.															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		.	R	L	F	P	N	Q	A	I	Q	F	A	K	E	V	.	E	Q	Y	K	P	Y	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	I	L	P	P	N	Q	T	E	W	L	D	N	I	R	S	Q	S	.	S	V	S	L	G	L	G	E	L	F	N	N	P	E	E	W	K	S	L	I
Template Known Secondary structure		.		S													.	G	G	G			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T		G	G	G						T	T		.								T	T			S
Template Predicted Secondary structure		.															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
			211	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.																	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		225	.			.	.	.	230	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		Q	H	.	.	M	D	G	V	M	V
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		A	N	R	R	I	D	F	I	R	C
Template Known Secondary structure			T	T			S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions