Job Description P32695 Confidence 97.35% Date Thu Jan 5 11:50:18 GMT 2012 Rank 187 Aligned Residues 134 % Identity 14% Template c3ddmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50 Resolution 2.60 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	V	A	L	Q	L	G	G	S	D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		D	R	I	G	V	Y	A	S	G	I	N	P	E	N	P	E	D	V	V	A	R	K	A	A	E	G	Y	R	A	F	K	L	K	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	D	A	R	D	V	R	N	A	L	H	V	R	E	L	L	G	A	A	T	.	.	P	L	M	A	D	A
Template Known Secondary structure													S	S													T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																		S	S	S	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H
Query Conservation
Alig confidence																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		N	Q	G	W	D	L	P	R	A	R	Q	M	A	Q	R	L	.	G	P	A	Q	L	D	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	P	L	R	A	D	R	P	A	A	E	W	A	E	L	A	Q	A	A	.	P	M	P	L	A	G	G	E	N	I	A	G	V	A	A	F	E	T	A
Template Known Secondary structure		T	T															.	G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T	S													.	S	S						T	T			S
Template Predicted Secondary structure																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230																.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		224	.	.			.	.	.	230	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		L	Q	H	.	.	M	D	G	V	M	V
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		L	A	A	R	S	L	R	V	M	Q	P
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions