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Job DescriptionP32695
Confidence93.36%DateThu Jan 5 11:50:18 GMT 2012
Rank324Aligned Residues227
% Identity15%Templatec3daqB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20... ......30... ......40... ......50.........60.........70........
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Query Sequence  FSVAPMLDWTD. . . . . RHCRYFLRLL. . . SRNTLLYTEM. . . . . . VTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAAL
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Template Sequence  VGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKS
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  AQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINT
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Template Sequence  IQASIQAKALGADAIML. . . . . . . . . . . . ITPYYNKTNQRGLVKHFEAIADAVKLPVVL. . . YNVPSRTNMTIEPETVEI
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   88.90.........100.... .....110.........120.........130.... .....140.........150..
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  VSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQ
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Template Sequence  LSQHPYIVALKDATN. . . . . . . . . . . . . . . . . . DFEYLEEVKKRIDTNSFALYSG. NDDNVVEYYQRGGQGVISVIANV.
Template Known Secondary structure  TSTT


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   153......160....... ..170.........180......... 190.........200.........210..
 
   239240.........250.........260.........270........
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Query Sequence  NPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQG
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Template Sequence  IPKEFQALYDAQQSGL. . . . DIQDQFKPIGTLLSALSVDI
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   213......220........ .230.........240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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