Job Description P32695 Confidence 89.30% Date Thu Jan 5 11:50:18 GMT 2012 Rank 364 Aligned Residues 237 % Identity 14% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		13	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.															.	.	.										.	.	.	.	.	.
Query SS confidence									.	.	.	.	.															.	.	.										.	.	.	.	.	.
Query Sequence		F	S	V	A	P	M	L	.	.	.	.	.	D	W	T	D	R	H	C	R	Y	F	L	R	L	L	.	.	.	S	R	N	T	L	L	Y	T	E	.	.	.	.	.	.	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	G	G	S	D	P	A	A	L
Query Conservation									.	.	.	.	.															.	.	.										.	.	.	.	.	.
Alig confidence									.	.	.	.	.															.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	V	A	I	I	T	P	F	T	N	T	G	V	D	F	D	K	L	S	E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	T	G	S	N	N	T	A	A	S
Template Known Secondary structure										B		S	S	S	B															T	T							S	S	G	G	G	T	G	G	G	S																	T	T	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Sequence		I	A	M	S	K	W	A	E	S	I	G	V	D	G	L	L	V	.	.	.	.	.	.	.	.	.	.	.	.	I	T	P	Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	V	S	D	A	V	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	.	.	.	I	T	P	G	T	L	K	E
Template Known Secondary structure											T	T		S					.	.	.	.	.	.	.	.	.	.	.	.					S	S																	T			S												S			.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.													.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	H	M	D	G	V	M	V	G	R	E	A	Y	Q
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		L	C	E	D	K	N	I	V	A	V	K	E	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	S	Q	I	A	Q	I	K	A	L	C	G	D	K	L	D	I	Y	S	G	.	.	N	D	D	Q	I	I	P	I	L	A	L	G	G	I	G	V	I	S	V	L	A	N	V	I
Template Known Secondary structure			T	T	S	S	S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													G	G	G						S	.	.		G	G	G							T	T							S	G	G	G	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.																			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	G	I	L	A	A	V	D	R	E	I	F	G	S	S	D	T	D	A	D	P	V	A	V	V	R	A	M	Y	P	Y	I	E	R	E	L	S	Q	G	T	Y	L	G	H	I	T	R	H	M
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		P	E	D	V	H	N	M	C	E	L	Y	L	N	G	K	V	.	.	.	.	N	E	A	L	K	I	Q	L	D	S	L	A	L	T	N	A	L	F	I	E	T	N	P	I	P	V	K	T	A	M
Template Known Secondary structure														T	T			.	.	.	.										T							T	T	S	S	S	T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions