Job Description P32695 Confidence 100.00% Date Thu Jan 5 11:50:18 GMT 2012 Rank 21 Aligned Residues 239 % Identity 20% Template c3atyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin f2a synthase; PDBTitle: crystal structure of tcoye Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	T	D	V	H	W	S	G	R	F	S	V	A	P	M	L	D	W	.	.	.	.	.	.	.	.	.	.	T	D	R	H	C	R	Y	F	L	R	L	L	S	R	N	T	L	L	Y	T	E	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.															.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.
Template Sequence		K	L	G	R	Y	T	L	R	N	R	I	I	M	A	P	L	T	R	C	Q	A	T	E	D	D	H	V	P	R	T	E	S	M	L	K	Y	Y	E	D	R	A	S	A	.	G	L	I	I	A	E	A	T	M	V	Q	P	N	Y	T	G	F	L	T	E	P	G	I	Y	S	D	A	Q	I	E	E	W	R	K	I	V
Template Known Secondary structure				T	T				S		S											B		T	T	T			B											T	T	T	T	S	.	S									S	S	T	T			S	S	S	S			B	S	S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
					60	.	.	.	.	.	.	.	.	.	70	.	.	.																																																															.
Predicted Secondary structure		.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	E	E	E	H	P	V	A	L	Q	L	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation		.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	V	H	K	K	G	G	L	I	F	L	Q	L	I	H	A	G	R	A	G	I	P	E	K	I	L	Q	Q	S	K	S	D	Q	D	P	L	A	G	R	L	L	A	A	S	A	I	P	I	K	D	H	R	I	P	A	Y	F	A	A	S	G	E	K	E	T	Y	G	V	P	E	E	L	T	D	D	E	V	R	D
Template Known Secondary structure							T	T											G	G	G	S						T	T	S				S	S	S	T	T	T	T					S	S	S					S			B		T	T	T	S	T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
				75	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.													.														.	.	.	.	.	.	.	.	.										.	.
Query SS confidence		.	.													.														.	.	.	.	.	.	.	.	.										.	.
Query Sequence		.	.	P	A	A	L	A	Q	C	A	K	L	A	E	.	A	R	G	Y	D	E	I	N	L	N	V	G	C	.	.	.	.	.	.	.	.	.	P	S	D	R	V	Q	N	G	M	.	.	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R
Query Conservation		.	.													.														.	.	.	.	.	.	.	.	.										.	.
Alig confidence		.	.													.														.	.	.	.	.	.	.	.	.										.	.																												.
Template Conservation																																																																													.
Template Sequence		G	I	I	P	L	F	V	E	G	A	K	N	A	I	F	K	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	L	D	A	F	F	R	E	S	S	N	K	R	Q	S	G	P	Y	A	G	T	T	I	D	T	R	C	Q	L	I	Y	D	V	T	K	S	V	C	D	A	V	G	S	D	R	.	V	G	L	R
Template Known Secondary structure		T															T	S			S								T	T	S							S	T	T	T					S	S	T	T		T	T	S																					G	G	G	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.
		141	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		I	G	I	D	D	Q	D	.	.	.	.	.	.	.	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.													.														.	.	.	.	.	.	.	.	.	.	.	.																			.									.
Template Conservation																												.														.	.	.	.	.	.	.	.	.	.	.	.																			.									.
Template Sequence		I	S	P	L	N	G	V	H	G	M	I	D	S	N	P	E	A	L	T	K	H	L	C	K	K	I	.	E	P	L	S	L	A	Y	L	H	Y	L	R	G	.	.	.	.	.	.	.	.	.	.	.	.	D	M	V	N	Q	Q	I	G	D	V	V	A	W	V	R	G	S	Y	.	S	G	V	K	I	S	N	L	.
Template Known Secondary structure				T	T			G	G	G				S														.	G	G	G			S							S	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S												T	T		.		S						S	.
Template Predicted Secondary structure																												.														.	.	.	.	.	.	.	.	.	.	.	.																			.									.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.													.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		I	K	S	L	E	E	A	K	A	H	L	Q	H	.	.	M	D	G	V	M	V	G	R	E	A	Y	Q	N	P	G	I	L	A	A	V	D	R	E	I	F	G	S	S	D	T	D	A	D	P	V
Query Conservation															.	.
Alig confidence															.	.																							.	.	.
Template Conservation																																							.	.	.
Template Sequence		R	Y	D	F	E	E	A	D	Q	Q	I	R	E	G	K	V	D	A	V	A	F	G	A	K	F	I	A	N	P	D	L	V	E	R	A	Q	Q	.	.	.	N	W	P	L	N	E	P	R	P	E
Template Known Secondary structure		S												T	T	S		S					S							T	T								.	.	.	T								G	G
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions