Return to main results Retrieve Phyre Job Id

Job DescriptionP32695
Confidence98.20%DateThu Jan 5 11:50:18 GMT 2012
Rank126Aligned Residues143
% Identity22%Templatec2zbtB_
PDB info PDB header:lyaseChain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  AQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINT
Query Conservation    

      
 
 



 


         
  
        


 


     

 





 
              
Alig confidence 






























..





....





















..........




Template Conservation   


 






 





 





  


..


 

....  
 

   




 

 



..........  

 
Template Sequence  PEQAVIAEEAGAVAVMALERVPADIRAQGGV. . ARMSDP. . . . KIIKEIMAAVSIPVMAKVRIGH. . . . . . . . . . FVEAM
Template Known Secondary structure  T
S
SS
TT

..




....
SS
TT
..........
Template Predicted Secondary structure 






..




....





..........
Template SS confidence 















































































   31........40.........50.........60. ...... ..70.........80......... 90....
 
   159160.........170.. .......180.........190..
Predicted Secondary structure 






.



















.............................................
Query SS confidence 













.



















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  VSGKGECEMFIIHA. RKAWLSGLSPKENREIPPLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
    

  
 

 .
     
             .............................................
Alig confidence 













.



















.............................................
Template Conservation 







 










   



  
 





 
 







 
















 


 
 
 
  

Template Sequence  ILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEI
Template Known Secondary structure  TT
STTS

S
SS



GGG
SS
SSTT
S


SSS

T
Template Predicted Secondary structure 


































Template SS confidence 















































































   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   193......200......... 210.........220..... ....230........
Predicted Secondary structure  .....................




..




.

Query SS confidence  . . . . . . . . . . . . . . . . . . . . .
















. .















.












Query Sequence  . . . . . . . . . . . . . . . . . . . . . YPRVYQLKRDFPHLTMS. . INGGIKSLEEAKAHLQ. HMDGVMVGREAYQ
Query Conservation  .....................   
         



.. 

 
 
  

   
 .  
 




  
 
Alig confidence  .....................










.




..















.












Template Conservation 
 
  
 


    
    

 


  

  
.




 


















 










Template Sequence  RYVQSLREDELMAYAKEIGAPFELVKWVHDHG. RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFK
Template Known Secondary structure  S
GGGT

S.S
SSB
SS

STT
S
GGGGG
Template Predicted Secondary structure 



.















Template SS confidence 





































































   175....180.........190.........200...... ...210.........220.........230.........240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions