Job Description P32695 Confidence 97.65% Date Thu Jan 5 11:50:18 GMT 2012 Rank 167 Aligned Residues 143 % Identity 25% Template c2yzrB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from2 methanocaldococcus jannaschii Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T
Query Conservation
Alig confidence																																		.	.						.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.						.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	Q	A	Q	I	A	E	E	A	G	A	V	A	V	M	A	L	E	R	V	P	A	D	I	R	A	A	G	G	V	A	.	.	R	M	S	D	P	.	.	.	.	A	L	I	E	E	I	M	D	A	V	S	I	P	V	M	A	K	C	R	I	G	H	.	.	.	.	.	.	.	.	.	.	T	T	E	A	L
Template Known Secondary structure												T		S						S	S										S			.	.						.	.	.	.											S	S								T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.						.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.											.	.	.	.	90
		159	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	G	K	G	E	C	E	M	F	I	I	H	A	.	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	E	A	I	G	V	D	M	I	D	E	S	E	V	L	T	Q	A	D	P	F	F	H	I	Y	K	K	K	F	N	V	P	F	V	C	G	A	R	N	L	G	E	A	V	R	R	I	W	E	G	A	A	M	I	R	T	K	G	E	A	G	T	G	N	I	V	E	A	V	R	H	M	R	L	M	N	E	A	I
Template Known Secondary structure						T	T		S						T	T	S			S		S	S					G	G	G		S	S							S	S										T	T		S								T	T	S			T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
																																																												193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	.	.	I	N	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.						.	.
Template Conservation																																																																							.
Template Sequence		A	Q	L	Q	R	M	T	D	E	E	V	Y	G	V	A	K	F	Y	A	N	R	Y	A	E	L	A	K	T	V	R	E	G	M	G	L	P	A	T	V	L	E	N	E	P	I	Y	E	G	F	T	L	A	E	I	I	D	G	L	Y	E	V	L	L	E	V	K	K	L	G	.	R	L	P	V	V	N	F	A	A	G
Template Known Secondary structure					T	T	S														G	G	G	G										T	T	S		S				T	T	S				T	T																					T	.	S		S	S						S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		G	I	K	S	L	E	E	A	K	A	H	L	Q	.	H	M	D	G	V	M	V	G	R	E	A	Y	Q
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		G	V	A	T	P	A	D	A	A	L	M	M	Q	L	G	S	D	G	V	F	V	G	S	G	I	F	K
Template Known Secondary structure					S										T	T		S					S					T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions