 |
Job Description | P32695 | Confidence | 97.22% | Date | Thu Jan 5 11:50:18 GMT 2012 |
Rank | 201 | Aligned Residues | 99 |
% Identity | 14% | Template | c2yr1B_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:3-dehydroquinate dehydratase; |
PDBTitle: crystal structure of 3-dehydroquinate dehydratase from geobacillus2 kaustophilus hta426
|
Resolution | 2.00 Å |
|
 |
  |   |
61 | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
E | E | E | H | P | . |
V | A | L | Q | L | G | G | S | D | P | A | A | L | A | Q | C | A | K | L | A | E | A | R | G | Y | D | E | I | N | L | N | V | G | C | P | S | D | R | V | Q | N | G | M | F | G | A | C | L | M | G | N | A | Q | L | V | A | D | C | V | K | A | M | R | D | V | V | . |
S | I | P | V | T | V | K |
Query Conservation |   |
  |   |   |   |
| . |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   | . |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|
|   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |   |   | . | . |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
G | G | T | E | P | C | I | C | A | P | V | V | G | E | D | D | R | K | V | L | R | E | A | E | E | V | C | R | K | Q | P | D | L | L | E | W | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | A | D | F | F | R | A | I | . |
. |
D | D | Q | E | R | V | L | A | T | A | N | G | L | R | N | I | A | G | E | I | P | I | L | F | T |
Template Known Secondary structure |   |
S | S | S | S |
|  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  | . | . | . | . | . | . | . | . | . |  | G | G | G |
| T | T | T | . | . | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
139 | 140 | . | . | . | . | |
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |  |
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | I | G | I | D | . |
. |
. |
. |
D | Q | D | S | Y | E | F | L | C | D | F | I | N | T | V | S | G | K | G | E | C | E | M | F | I | I |
Query Conservation |   |
|
|
|
|   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
I | R | S | E | R | E | G | G | Q | P | I | P | L | N | E | A | E | V | R | R | L | I | E | A | I | C | R | S | G | A | I | D | L | V | D | Y |
Template Known Secondary structure |   |
|
|
| G | G | G | T |
|
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|