Job Description P32695 Confidence 97.75% Date Thu Jan 5 11:50:18 GMT 2012 Rank 162 Aligned Residues 141 % Identity 16% Template c2oo6A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	G	S	D	P	A	A	L	A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	.	.	.	.	.	.	.	.	.	.	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V	S	I	P	V	T	V	K	T
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	V	T	D	L	D	G	V	K	R	T	A	E	E	A	R	E	R	Q	F	R	A	I	K	T	N	I	F	I	H	D	D	G	P	L	H	A	W	R	P	G	F	A	V	P	F	Q	P	A	L	N	V	D	R	K	V	L	R	N	L	R	A	H	L	E	A	L	R	D	G	A	G	P	D	V	E	I	L	L
Template Known Secondary structure		S				S														T	T												S	S	S	S					B	G	G	G	T	B	S			T	T																								S	S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L	T	M	S	I	N	G	G	I	K	S	L	E	E
Query Conservation
Alig confidence						.	.															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.																	.
Template Conservation						.	.															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.																	.
Template Sequence		D	L	N	F	.	.	N	A	K	P	E	G	Y	L	K	I	L	R	E	L	.	A	D	F	D	L	F	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	.	.	.	D	S	Y	S	P	Q	G	L	A	Y	V	R	N	H	S	P	.	H	P	I	S	S	C	E	T	L	F	G	I	R	E
Template Known Secondary structure				T	T	.	.		S												T	.	T	T	S			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.			S											T		S	.	S						T	T
Template Predicted Secondary structure						.	.															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.																	.
Template SS confidence
		217	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.																.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.
		220	.	.	.	.	.	.			.	.	.	230	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		A	K	A	H	L	Q	H	.	.	M	D	G	V	M	V
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		F	K	P	F	F	D	A	N	A	V	D	V	A	I	V
Template Known Secondary structure								T	T			S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions