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Job DescriptionP32695
Confidence99.57%DateThu Jan 5 11:50:18 GMT 2012
Rank61Aligned Residues207
% Identity14%Templatec2e77B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate oxidase; PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.. .......30.........40.........50.........60.........70 ........
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Query Sequence  DVHWSGRFSVAPMLDWT. . . . . . DRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQL. GGSDPAAL
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Template Sequence  GHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTI. MSISA. . . . . . YSGATFEEISEGLNGGPRWFQIYMAKDDQQN
Template Known Secondary structure  TSSS


S
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   1082.......1090.........1100.........1110........ .1120... ......1130.........1140.........1150....
 
   7980.........90.........100.........110..... ....120.........130.
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Query Sequence  AQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMG. . . . . . . . . . . . . . . . . . . . . . . . . . . NAQLVADCVKAMRDVV
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Template Sequence  RDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHS
Template Known Secondary structure  T
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TTTGGGTTS
GGG

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   1155....1160.........1170.........1180.........1190.........1200.........1210.........1220.........1230....
 
   132.......140.........150.........160.........170.........180.........190.........200..... ....210
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Query Sequence  SIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPH. LTMSI
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Template Sequence  GLPVFVKGIQH. . . . . . . . . . PEDADMAIKR. GASGIWVSNHGA. . . . . . . . RQLYEAPGSFDTLPAIAERVNKRVPIVF
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   1235....1240..... ....1250..... ....1260....... ..1270.........1280.........1290.....
 
   211........220..... ....230........
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Query Sequence  NGGIKSLEEAKAHLQ. HMDGVMVGREAYQ
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Template Sequence  DSGVRRGEHVAKALASGADVVALGRPVLF
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   1296...1300.........1310.........1320....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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