Job Description P32695 Confidence 99.57% Date Thu Jan 5 11:50:18 GMT 2012 Rank 61 Aligned Residues 207 % Identity 14% Template c2e77B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lactate oxidase; PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																																	.
Query SS confidence																			.	.	.	.	.	.																																																	.
Query Sequence		D	V	H	W	S	G	R	F	S	V	A	P	M	L	D	W	T	.	.	.	.	.	.	D	R	H	C	R	Y	F	L	R	L	L	S	R	N	T	L	L	Y	T	E	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	.	G	G	S	D	P	A	A	L
Query Conservation																			.	.	.	.	.	.																																																	.
Alig confidence																			.	.	.	.	.	.															.						.	.	.	.	.	.																							.
Template Conservation																																							.						.	.	.	.	.	.
Template Sequence		G	H	K	I	K	A	P	F	I	M	A	P	I	A	A	H	G	L	A	H	T	T	K	E	A	G	T	A	R	A	V	S	E	F	G	T	I	.	M	S	I	S	A	.	.	.	.	.	.	Y	S	G	A	T	F	E	E	I	S	E	G	L	N	G	G	P	R	W	F	Q	I	Y	M	A	K	D	D	Q	Q	N
Template Known Secondary structure		T				S	S	S							S		G	G	G	T		T	T													T	S		.					T	.	.	.	.	.	.	T		S	S										T	T											S	S
Template Predicted Secondary structure																																							.						.	.	.	.	.	.
Template SS confidence
		1082	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.		.	1120	.	.	.							.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	L	V	A	D	C	V	K	A	M	R	D	V	V
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	I	L	D	E	A	K	S	D	G	A	T	A	I	I	L	T	A	D	S	T	V	S	G	N	R	D	R	D	V	K	N	K	F	V	Y	P	F	G	M	P	I	V	Q	R	Y	L	R	G	T	A	E	G	M	S	L	N	N	I	Y	G	A	S	K	Q	K	I	S	P	R	D	I	E	E	I	A	G	H	S
Template Known Secondary structure												T		S							S		S	S										T	T				S	S			T	T	T	G	G	G	T	T	S		G	G	G										S		S
Template Predicted Secondary structure
Template SS confidence
		1155	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	.	L	T	M	S	I
Query Conservation																																																																												.
Alig confidence													.	.	.	.	.	.	.	.	.	.											.													.	.	.	.	.	.	.	.																							.
Template Conservation													.	.	.	.	.	.	.	.	.	.											.													.	.	.	.	.	.	.	.
Template Sequence		G	L	P	V	F	V	K	G	I	Q	H	.	.	.	.	.	.	.	.	.	.	P	E	D	A	D	M	A	I	K	R	.	G	A	S	G	I	W	V	S	N	H	G	A	.	.	.	.	.	.	.	.	R	Q	L	Y	E	A	P	G	S	F	D	T	L	P	A	I	A	E	R	V	N	K	R	V	P	I	V	F
Template Known Secondary structure			S									S	.	.	.	.	.	.	.	.	.	.										T	.	T		S							G	G	G	.	.	.	.	.	.	.	.	T	S	S	S	S																T	T	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.											.													.	.	.	.	.	.	.	.
Template SS confidence
		1235	.	.	.	.	1240	.	.	.	.	.											.	.	.	.	1250	.	.	.	.	.		.	.	.	.	1260	.	.	.	.	.	.	.									.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	.	H	M	D	G	V	M	V	G	R	E	A	Y	Q
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		D	S	G	V	R	R	G	E	H	V	A	K	A	L	A	S	G	A	D	V	V	A	L	G	R	P	V	L	F
Template Known Secondary structure			S	S			S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		1296	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions