 |
Job Description | P32695 | Confidence | 89.28% | Date | Thu Jan 5 11:50:18 GMT 2012 |
Rank | 365 | Aligned Residues | 73 |
% Identity | 21% | Template | c2e28A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:pyruvate kinase; |
PDBTitle: crystal structure analysis of pyruvate kinase from bacillus2 stearothermophilus
|
Resolution | 2.40 Å |
|
 |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
. | . | . | . | . | . | 210 | |
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | L | C | D | F | I | N | T | V | S | G | K | G | E | C | E | M | F | I | I | H | . |
A | R | K | A | W | L | S | G | L | S | P | K | E | N | R | E | I | P | P | L | D | Y | P | R | V | Y | Q | L | K | R | D | F | . |
. |
P | H | L | T | M | S | I | . |
N | G | G | I | K | S | L | E | E | A | K | A | H | L | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |
|
| . |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . |   |   |
|
|
|
|   | . |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |
|
|   |   |   | . |   |
|
|   |
|
|
|
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |   |   |
|
|   |
|
|
|
|
|
|   |
Template Sequence |   |
E | K | D | R | A | D | I | L | F | G | I | R | Q | . |
G | I | D | F | I | A | A | S | F | V | R | R | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | L | E | I | R | E | L | L | E | A | H | D | A | L | H | I | Q | I | I | A | K | I | E | N | E | E | G | V | A | N | I | D | E | I | L | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
| S |  |  |  |  | S | S |
|
| S |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  |
| S |  |  |  |  |  | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
  |   |
226 | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | M | D | G | V | M | V | G | R | E | A | Y | Q |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
A | A | D | G | L | M | V | A | R | G | D | L | G |
Template Known Secondary structure |   |
 | S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|