Job Description P32695 Confidence 99.71% Date Thu Jan 5 11:50:18 GMT 2012 Rank 44 Aligned Residues 205 % Identity 14% Template c2a7nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l(+)-mandelate dehydrogenase; PDBTitle: crystal structure of the g81a mutant of the active chimera of (s)-2 mandelate dehydrogenase Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		D	V	H	W	S	G	R	F	S	V	A	P	M	L	D	W	T	.	.	.	.	.	.	D	R	H	C	R	Y	F	L	R	L	L	S	R	N	T	L	L	Y	T	E	M	V	T	T	G	A	I	I	H	G	K	G	D	Y	L	A	Y	S	E	E	E	H	P	V	A	L	Q	L	G	G	S	D	P	A	A	L	A
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		G	K	R	Q	S	M	P	L	L	I	G	P	T	A	L	N	G	A	L	W	P	K	G	D	L	A	L	A	R	A	A	T	K	A	G	I	P	F	V	L	S	T	A	S	N	M	S	I	E	D	L	A	.	.	.	.	.	.	.	.	R	Q	C	D	G	D	L	W	F	Q	L	Y	V	I	H	R	E	I	A	Q
Template Known Secondary structure		T				S	S	S							S		G	G	G	T	S	T	T													T							T	T		S	S							.	.	.	.	.	.	.	.					S									S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																																		.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	C	A	K	L	A	E	A	R	G	Y	D	E	I	N	L	N	V	G	C	P	S	D	R	V	Q	N	G	M	F	G	A	C	L	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	L	V	A	D	C	V	K	A
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	V	L	K	A	L	H	T	G	Y	T	T	L	V	L	T	T	D	V	A	V	N	G	Y	R	E	R	D	L	H	N	R	F	K	I	P	P	F	L	T	L	K	N	F	E	G	I	D	L	G	K	M	D	K	A	N	L	E	M	Q	A	A	L	M	S	R	Q	M	D	A	S	F	N	W	E	A	L	R	W
Template Known Secondary structure										T	T									S		S	S											T					T	T				G	G	G	T	T				S			S	S	T	T	T							T	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	D	V	V	S	I	P	V	T	V	K	T	R	I	G	I	D	D	Q	D	S	Y	E	F	L	C	D	F	I	N	T	V	S	G	K	G	E	C	E	M	F	I	I	H	A	R	K	A	W	L	S	G	L	S	P	K	E	N	R	E	I	P	P	L	D	Y	P	R	V	Y	Q	L	K	R	D	F	P	H	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.											.													.	.	.	.	.	.	.	.																					.
Template Conservation																		.	.	.	.	.	.	.	.	.	.											.													.	.	.	.	.	.	.	.																					.
Template Sequence		L	R	D	L	W	P	H	K	L	L	V	K	G	L	L	S	.	.	.	.	.	.	.	.	.	.	A	E	D	A	D	R	C	I	A	E	.	G	A	D	G	V	I	L	S	N	H	G	G	.	.	.	.	.	.	.	.	R	Q	L	D	C	A	I	S	P	M	E	V	L	A	Q	S	V	A	K	T	.	G	K
Template Known Secondary structure								S									S	.	.	.	.	.	.	.	.	.	.										T	.	T		S							G	G	G	.	.	.	.	.	.	.	.	T	S		T	T				G	G	G	S									.		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.											.													.	.	.	.	.	.	.	.																					.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.											.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.									.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		T	M	S	I	N	G	G	I	K	S	L	E	E	A	K	A	H	L	Q	.	H	M	D	G	V	M	V	G	R	E	A	Y	Q
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		P	V	L	I	D	S	G	F	R	R	G	S	D	I	V	K	A	L	A	L	G	A	E	A	V	L	L	G	R	A	T	L	Y
Template Known Secondary structure							S	S			S										T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions