Return to main results Retrieve Phyre Job Id

Job DescriptionP23908
Confidence98.87%DateThu Jan 5 11:40:32 GMT 2012
Rank73Aligned Residues101
% Identity13%Templated1xmba2
SCOP infoFerredoxin-like Bacterial exopeptidase dimerisation domain Bacterial exopeptidase dimerisation domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   181........190.........200.........210.........220.........230.........240.........250.........260
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  GHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELH
Query Conservation 
     
 
 
   


      


         
                           
  
   
 

  
   
Alig confidence 











.........

















.......















........









Template Conservation      
 
 
 

.........
 


  

  
  
  
.......


 
 
    




........



  
 
 
Template Sequence  GAGVFEAVITGK. . . . . . . . . TIDPVVAASSIVLSLQQL. . . . . . . VSRETDPLDSKVVTVS. . . . . . . . KVNPDSITIG
Template Known Secondary structure 
.........

TT.......
B

SSGGG
........


Template Predicted Secondary structure 


.........

.......







........


Template SS confidence 















































































   217..220........ .230.........240...... ...250.........260.. .......270..
 
   261........270.........280.........290.........300.......
Predicted Secondary structure 














Query SS confidence 














































Query Sequence  MDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYEC
Query Conservation    

             
                             
Alig confidence 










..

































Template Conservation 



       ..    
  
    
   
   
         

 
Template Sequence  GTLRAFTGFTQ. . LQQRVKEVITKQAAVHRCNASVNLTPNGREPMPP
Template Known Secondary structure  SS
..TTSSGGG


B

Template Predicted Secondary structure 

..









Template SS confidence 














































   290.........300 .........310.........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions