Return to main results Retrieve Phyre Job Id

Job DescriptionP23908
Confidence100.00%DateThu Jan 5 11:40:32 GMT 2012
Rank28Aligned Residues249
% Identity24%Templated1lfwa1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20........ .30.........40.........50.........60.........70.......
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Query Sequence  NKLPPFIEIYRALIATPSISATEEAL. . . . . DQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLL
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Template Sequence  AKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENFAN. . . . . . YAGRVNFGAGDKRLGI
Template Known Secondary structure  TTTS

B

GGG

SSSTT
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   11........20.........30.........40.........50.........60........ .70.........80....
 
   78.80.........90.........100.........110.........120.........130. ........140.........150.....
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Query Sequence  AGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILDALRDVDVTK. . LKKPLYILATADEETSMAGARYFA
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Template Sequence  IGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGIDYYL
Template Known Secondary structure 

B



S

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  ETTALRPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVP
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Template Sequence  KHE. PTPDIVFSPDAEYP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S.


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   165.. ..170.........180.
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  YPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IINGEHYVPGSDPMVQTLLK
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B

TT
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   182.......190.........200.
 
   316...320........ .330.........340.........350.........360.........370.........380
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Query Sequence  VVEKLLGAKTEVV. . NYCTEAPFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVIHHF
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Template Sequence  VYEKQTGKPGHEVVIGGGTYGRLFERGVAFGAQPENGPMVMHAANEFMMLDDLILSIAIYAEAIYEL
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GGGGSTT



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   398.400.........410.........420.........430.........440.........450.........460....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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