Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 17 Aligned Residues 352 % Identity 24% Template c3tx8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution Resolution 2.97 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		N	K	L	P	P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	G	Q	G	A	.	G	G	L	L	L	A	G	H	T
Query Conservation																																																																								.
Alig confidence																									.	.	.	.	.	.	.																							.	.	.	.															.
Template Conservation																									.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		D	L	L	G	D	P	I	V	L	T	Q	R	L	V	D	I	P	S	P	S	G	Q	E	.	.	.	.	.	.	.	K	Q	I	A	D	E	I	E	D	A	L	R	N	L	N	L	P	G	V	E	V	F	.	.	.	.	R	F	N	N	N	V	L	A	R	T	N	R	G	L	A	S	R	V	X	L	A	G	H	I
Template Known Secondary structure					S											S	S			B	T	T		T	.	.	.	.	.	.	.													T	T	T		T	T					.	.	.	.			T	T											S
Template Predicted Secondary structure																									.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		D	T	V	P	F	D	D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	.	.	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A
Query Conservation																																																					.	.
Alig confidence								.	.	.	.	.	.																																								.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		D	T	V	P	I	A	.	.	.	.	.	.	D	N	L	P	S	R	V	E	D	G	I	X	Y	G	C	G	T	V	D	X	K	S	G	L	A	V	Y	L	H	T	F	A	T	L	A	T	S	T	E	L	K	H	D	L	T	L	I	A	Y	E	C	E	E	V	A	D	H	L	N	G	L	G	H	I	R	D	E	H
Template Known Secondary structure			B	S				.	.	.	.	.	.	S			S					S	S				S	S	S	T	T	T	T															T	S		T	T			S											S	S		T	T	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		L	.	.	.	R	P	D	C	A	I	I	G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y
Query Conservation			.	.	.
Alig confidence			.	.	.																																																											.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		P	E	W	L	A	A	D	L	A	L	L	G	E	P	T	G	G	W	I	E	A	G	C	Q	G	N	L	R	I	K	V	T	A	H	G	V	R	A	H	S	A	R	S	W	L	G	D	N	A	X	H	K	L	S	P	I	I	S	K	V	A	A	.	.	.	.	Y	K	A	A	E	V	N	I	D	G	L	T	Y	R
Template Known Secondary structure		G	G	G	G			S									T	T					S	B													B			B	T	T	S	G	G	G	S	B		T	G	G	G	G										.	.	.	.									T	T
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	N	L	G	H	I	H	G	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V
Query Conservation
Alig confidence																																																					.									.	.	.
Template Conservation																																																					.									.	.	.
Template Sequence		E	G	L	N	I	V	F	C	E	S	G	V	A	N	N	V	I	P	D	L	A	W	X	N	L	N	F	R	F	A	P	N	R	D	L	N	E	A	I	E	H	V	V	E	T	L	E	L	D	G	Q	.	D	G	I	E	W	A	V	E	.	.	.	D	G	A	G	G	A	L	P	G	L	G	Q	Q	V	T	S	G
Template Known Secondary structure													S	B	T	T	B			S												T	T	S													T	T	T	T	T	S	.	T	T							.	.	.						B				T	T	S
Template Predicted Secondary structure																																																					.									.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		317	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																.
Query SS confidence									.																.
Query Sequence		V	E	K	L	L	G	A	.	K	T	E	V	V	N	Y	C	T	E	A	P	F	I	Q	.	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H
Query Conservation									.																.
Alig confidence									.																.
Template Conservation
Template Sequence		L	I	D	A	V	G	R	E	K	I	R	A	K	F	G	W	T	D	V	S	R	F	S	A	X	G	I	P	A	L	N	F	G	A	G	D	P	S	F	A	H	K	R	D	E	Q	C	P	V	E	Q	I	T	D	V	A	A	I	L	K	Q	Y	L	S	E
Template Known Secondary structure								G	G	G						S			T						T	T	T								S	S		S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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