Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 19 Aligned Residues 345 % Identity 15% Template c3ramC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:hmra protein; PDBTitle: crystal structure of hmra Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		M	K	N	K	L	P	P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	G	Q	G	A	.	.	G	G	L	L	L	A
Query Conservation																																																																										.	.
Alig confidence																											.	.	.	.	.	.	.																									.	.	.														.	.
Template Conservation																											.	.	.	.	.	.	.																									.	.	.
Template Sequence		I	E	T	N	K	Y	S	Y	I	E	I	S	H	R	I	H	E	R	P	E	L	G	N	E	E	.	.	.	.	.	.	.	I	F	A	S	R	T	L	I	D	R	L	K	E	H	D	F	E	I	E	T	E	I	A	G	.	.	.	H	A	T	G	F	I	A	T	Y	D	S	G	L	D	G	P	A	I	G	F	L
Template Known Secondary structure					T														S			B	T	T			.	.	.	.	.	.	.													T	T	T								T	T	.	.	.												S	S	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		G	H	T	D	T	V	P	F	D	D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	.	.	A	G	A	R	Y	F	A	E
Query Conservation																																																																								.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																																						.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		A	E	Y	D	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	H	A	C	G	H	.	N	I	I	G	T	A	S	V	L	G	A	I	G	L	K	Q	V	I	D	Q	I	G	G	K	V	V	V	L	G	C	P	A	E	E	G	G	E	N	G	S	A	K	A	S	Y	V	K
Template Known Secondary structure						B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S	S			.																							S										T	T			T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		81	.	.	.	.	.	.																		.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																.	.																													.
Query SS confidence																.	.																													.
Query Sequence		T	T	A	L	R	P	D	C	A	I	I	G	E	P	.	.	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	.	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T
Query Conservation																.	.																													.
Alig confidence																.	.																													.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	V	I	D	Q	I	D	I	A	L	X	I	H	P	G	N	E	T	Y	K	T	I	D	T	L	A	V	D	V	L	D	V	K	F	Y	G	K	S	A	H	A	S	E	N	A	D	E	A	L	N	A	L	D	A	X	I	S	Y	F	N	G	V	A	Q	L	.	.	.	.	.	.	.	.	.	.	R	Q	H	I
Template Known Secondary structure			T	G	G	G	G		S									S	S	B	B					B													B			B	T	T	T		G	G	G		B																	.	.	.	.	.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	P	Y	P	T	L	N	L	G	H	I	H	G	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	.	P	I	P	G	Y	E	C	P	P	N	H	Q
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		K	K	D	Q	R	V	H	G	V	I	L	D	G	G	K	A	A	N	I	I	P	D	Y	T	H	A	R	F	Y	T	R	A	X	T	R	K	E	L	D	I	L	T	E	K	V	N	Q	I	A	R	G	A	A	I	Q	T	G	C	D	Y	E	F	G	P	I	Q	N	G	V	N	E	F	I	K	T	P	K	L	D	D
Template Known Secondary structure			T	T												S		T	T	B			S											S	S																							T								S	S			B
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		313	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.		.	.	.	.	.	.							.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure													.	.	.																						.	.									.							.	.	.	.	.	.
Query SS confidence													.	.	.																						.	.									.							.	.	.	.	.	.
Query Sequence		L	V	E	V	V	E	K	L	L	G	A	.	.	.	K	T	E	V	V	N	Y	C	T	E	A	P	F	I	Q	T	L	C	P	T	L	.	.	V	L	G	P	G	S	I	N	.	Q	A	H	Q	P	D	.	.	.	.	.	.	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F
Query Conservation													.	.	.																						.	.									.							.	.	.	.	.	.
Alig confidence													.	.	.																						.	.									.							.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	A	K	Y	A	E	E	V	G	E	A	V	I	D	D	D	F	G	Y	G	S	T	D	T	G	N	V	S	H	V	V	P	T	I	H	P	H	I	K	I	G	S	R	N	L	V	G	H	T	H	R	F	R	E	A	A	A	S	V	H	G	D	E	A	L	I	K	G	A	K	I	X	A	L	X	G	L	E	L
Template Known Secondary structure										T	T			B			S					B			T					T	T	T	S		B								S		T	T			T	T	S								T	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		381	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		373	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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