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Job DescriptionP23908
Confidence60.22%DateThu Jan 5 11:40:32 GMT 2012
Rank87Aligned Residues127
% Identity17%Templatec3kzwD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:cytosol aminopeptidase; PDBTitle: crystal structure of cytosol aminopeptidase from staphylococcus aureus2 col
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50........ .60.........70.........80.
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Query Sequence  LPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGT. . . RNKFNMLASIGQGAGGLLLAGHT
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Template Sequence  IGQSINLARDFSNMPPNVLTP. . . . . . . QTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITY
Template Known Secondary structure  S
TTTS
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TT
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   172.......180.........190.. .......200.........210.........220.........230.........240....
 
   82.......90.........100.........110.... .....120.........130.........140....
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Query Sequence  DTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMK. . . . . . . . . . . . GFFAFILDALRDVDVTKLKKPLYILATADE
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Template Sequence  NGKDKDEAP. . . . . . IALVGKGITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQLPVNIVGVLACAE
Template Known Secondary structure  SS
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TTGGGGGTT
S
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   245....250... ......260.........270.........280.........290.........300.........310...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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