Return to main results Retrieve Phyre Job Id

Job DescriptionP23908
Confidence20.88%DateThu Jan 5 11:40:32 GMT 2012
Rank95Aligned Residues127
% Identity14%Templatec3kr5E_
PDB info PDB header:hydrolaseChain: E: PDB Molecule:m17 leucyl aminopeptidase; PDBTitle: structure of a protease 4
Resolution2.56 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.... .....60.........70.........80.
Predicted Secondary structure 















...










Query SS confidence 

















































. . .


























Query Sequence  LPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQP. . . VPGTRNKFNMLASIGQGAGGLLLAGHT
Query Conservation      
  
  

 


 
  
             
   
   
       ...         
          
 
  
 
Alig confidence 




















.......





















...


























Template Conservation   
     





 
 
 


.......  

  
  

   
  
 

    
   


  



 

  




 
 
Template Sequence  YYFGTYYASQLIAAPSNYCNP. . . . . . . VSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTY
Template Known Secondary structure  S
TTTS
.......T

TT
TT
SS

Template Predicted Secondary structure 







.......














Template SS confidence 















































































   287..290.........300....... ..310.........320.........330.........340.........350.........
 
   82.......90.........100.........110.... .....120.........130.. .......140....
Predicted Secondary structure 
























..............



.




Query SS confidence 
































. . . . . . . . . . . . . .

















.











Query Sequence  DTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMK. . . . . . . . . . . . . . GFFAFILDALRDVDVTKL. KKPLYILATADE
Query Conservation 



     
   
       
 
 


  
 
..............        
         .          

Alig confidence 








......

















..............

















.











Template Conservation   
       ......













 


  
   
  

 

 







  


 
 
 



  

   
Template Sequence  KSKGDVKKK. . . . . . IALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIHFLSAVCE
Template Known Secondary structure 
SS


......


TTS
S
STT

GGGGGGGG

SS
Template Predicted Secondary structure 







......



















Template SS confidence 













































































   360........ .370.........380.........390.........400.........410.........420.........430.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions