Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 21 Aligned Residues 357 % Identity 15% Template c3ifeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'. Resolution 1.55 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																											.	.	.	.
Query SS confidence																									.	.	.																																											.	.	.	.
Query Sequence		K	L	P	P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	.	.	.	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	.	.	.	.	G	Q	G	A	G	G	L	L
Query Conservation																									.	.	.																																											.	.	.	.
Alig confidence																									.	.	.																													.	.	.	.	.										.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		M	K	E	E	L	I	E	R	F	T	R	Y	V	K	I	D	T	Q	S	N	E	D	S	H	T	V	P	T	T	P	G	Q	I	E	F	G	K	L	L	V	E	E	L	K	E	V	G	L	T	E	V	T	M	D	.	.	.	.	.	D	N	G	Y	V	M	A	T	L	P	A	N	T	D	K	D	V	P	V	I	G
Template Known Secondary structure															T	S			B			T	T			S	S	S	S	S																		T								.	.	.	.	.	T	T	S									B	S	S	S
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90																												.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		L	A	G	H	T	D	T	V	P	F	D	D	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	.	.	.	.	D	M	K	G	F	F	A	F	I	L	D	A	L	R
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		F	L	A	H	L	D	T	A	T	D	F	T	G	K	N	V	K	P	Q	I	H	E	N	F	D	G	N	A	I	T	L	N	E	E	L	N	I	V	L	T	P	E	Q	F	P	E	L	P	S	Y	K	G	H	T	I	I	T	T	D	G	T	T	L	L	G	A	D	D	K	A	G	L	T	E	I	M	V	A	M	N
Template Known Secondary structure								B		T	T	S			S	S							T	T			S	S						T	T	T	T					T	T	T		T	T	G	G	G	G	T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		126	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.
Predicted Secondary structure									.	.																																																																			.
Query SS confidence									.	.																																																																			.
Query Sequence		D	V	D	V	T	K	L	.	.	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	R	P	D	C	A	I	I	G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	.	P	A	R	G
Query Conservation									.	.																																																																			.
Alig confidence									.	.																	.																																																		.
Template Conservation																											.
Template Sequence		Y	L	I	H	N	P	Q	I	K	H	G	K	I	R	V	A	F	T	P	D	E	E	I	G	R	.	G	P	A	H	F	D	V	E	A	F	G	A	S	F	A	Y	M	M	D	G	G	P	L	G	G	L	E	Y	E	S	F	N	A	A	G	A	K	L	T	F	N	G	T	N	T	H	P	G	T	A	K	N	K	M
Template Known Secondary structure					T		T	T	S		B									S		G	G	G	T		.	T	G	G	G									S									S	T	T						B													B				G	G	G		T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I	H	G	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	A	T	K	L	A	M	E	F	N	G	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	E	E	A	P	E	Y	T	E	G	Y	E	G	F	Y	H	L	L	S	L	N	G	D	V	E	Q	S	K	A	Y	Y	I	I	R	D	F	D	R	K	N	F	E	A	R	K	N	T	I	E	N	I	V
Template Known Secondary structure		B												T	S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S	G	G	G			T	T													S	S											S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.														.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		283	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																																						.	.												.
Query SS confidence										.	.	.	.	.																																						.	.												.
Query Sequence		A	P	V	S	E	R	W	P	.	.	.	.	.	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T	E	V	.	.	V	N	Y	C	T	E	A	P	F	I	Q	.	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A
Query Conservation										.	.	.	.	.																																						.	.												.
Alig confidence										.	.	.	.	.																																						.	.												.												.
Template Conservation																																																																													.
Template Sequence		K	Q	M	Q	E	K	Y	G	Q	D	A	V	V	L	E	M	N	D	Q	Y	Y	N	M	L	E	K	I	E	P	V	R	E	I	V	D	I	A	Y	E	A	M	K	S	L	N	I	E	P	N	I	H	P	I	R	G	G	T	D	G	S	Q	L	S	Y	M	G	L	P	T	P	N	I	F	T	G	.	G	E	N	Y
Template Known Secondary structure										G	G	G												T					G	G	G	T													T	T								B	S	S										T	T									S	.			S	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	K	F	E	Y	V	S	V	D	V	M	E	K	A	V	Q	V	I	I	E	I	A	R	R	F
Template Known Secondary structure		T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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