Return to main results Retrieve Phyre Job Id

Job DescriptionP23908
Confidence30.52%DateThu Jan 5 11:40:32 GMT 2012
Rank92Aligned Residues127
% Identity19%Templatec3h8gC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:cytosol aminopeptidase; PDBTitle: bestatin complex structure of leucine aminopeptidase from pseudomonas2 putida
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40...... ...50.... .....60.........70.........80
Predicted Secondary structure 













.

...









Query SS confidence 









































.







. . .

























Query Sequence  LPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDL. GFNVEVQP. . . VPGTRNKFNMLASIGQGAGGLLLAGH
Query Conservation      
  
  

 


 
  
             
   
   .
       ...         
          
 
  
Alig confidence 




















.......













.







...

























Template Conservation         



 
 
 
   
.......   
  
   
    
  
 
     
   


  


  

   
  
 
 
Template Sequence  IATGMAFTRDLGNLPPNLCHP. . . . . . . SFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLN
Template Known Secondary structure  S
TTTSS.......
TT
TT
TTSSS

Template Predicted Secondary structure 







.......
















Template SS confidence 















































































   179180.........190......... 200.........210.........220.........230.........240.........250.
 
   81........90.........100.........110.... .....120.........130.........140....
Predicted Secondary structure 

























............








Query SS confidence 

































. . . . . . . . . . . .





























Query Sequence  TDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMK. . . . . . . . . . . . GFFAFILDALRDVDVTKLKKPLYILATADE
Query Conservation   



     
   
       
 
 


  
 
............        
                   

Alig confidence 









......

















............





























Template Conservation 
 
       ......
 











 



   
  

 

 






   


 
   


  
    
Template Sequence  YQGGKKADKP. . . . . . FVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQLPVNLVCLLACAE
Template Known Secondary structure 
S
TTS

......

TTS


STTGGGGGGGGT
SS
Template Predicted Secondary structure 







......

















Template SS confidence 











































































   252.......260. ........270.........280.........290.........300.........310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions