Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 13 Aligned Residues 352 % Identity 21% Template c3gb0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution Resolution 2.04 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.														.	.	.
Query SS confidence																																																						.	.														.	.	.
Query Sequence		K	L	P	P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	.	.	P	G	T	R	N	K	F	N	M	L	A	S	I	.	.	.	G	Q	G	A	G	G	L	L	L	A
Query Conservation																																																						.	.														.	.	.
Alig confidence																								.	.	.	.	.	.	.																								.	.														.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		N	Q	E	R	L	V	N	E	F	X	E	L	V	Q	V	D	S	E	T	K	F	E	.	.	.	.	.	.	.	A	E	I	C	K	V	L	T	K	K	F	T	D	L	G	V	E	V	F	E	D	D	T	X	A	V	T	G	H	G	A	G	N	L	I	C	T	L	P	A	T	K	D	G	V	D	T	I	Y	F	T
Template Known Secondary structure															T	S			B	T	T			.	.	.	.	.	.	.														T	T							S								S	S										S	S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																		.	.	.	.																							.
Query SS confidence																																		.	.	.	.																							.
Query Sequence		G	H	T	D	T	V	P	F	D	D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	.	.	.	.	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	.	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y
Query Conservation																																		.	.	.	.																							.
Alig confidence											.	.	.	.	.	.																		.	.	.	.																							.
Template Conservation											.	.	.	.	.	.
Template Sequence		S	H	X	D	T	V	V	P	G	.	.	.	.	.	.	N	G	I	K	P	S	I	K	D	G	Y	I	V	S	D	G	T	T	I	L	G	A	D	D	K	A	G	L	A	S	X	F	E	A	I	R	V	L	K	E	K	N	I	P	H	G	T	I	E	F	I	I	T	V	G	E	E	S	G	L	V	G	A	K	A
Template Known Secondary structure						B		S	S		.	.	.	.	.	.	S	S							T	T						S	S	S																							T	T												S		G	G	G	T	S
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		154	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure						.																																										.
Query SS confidence						.																																										.
Query Sequence		F	A	E	T	.	T	A	L	R	P	D	C	A	I	I	G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	.	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A
Query Conservation						.																																										.
Alig confidence						.																																										.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	R	E	R	I	T	A	K	Y	G	Y	A	L	D	S	D	G	K	V	G	E	I	V	V	A	A	P	T	Q	A	K	V	N	A	I	I	R	G	K	T	A	H	A	G	V	A	P	E	K	G	V	S	A	I	T	I	A	A	K	A	I	A	K	X	P	.	.	.	.	.	.	.	.	.	.	.	.	L	G
Template Known Secondary structure		S		G	G	G				S									S		T	T																			B			B	T	T	T		G	G	G	S	B											T	T	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.													.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		F	T	V	P	Y	P	T	L	N	L	G	H	I	H	G	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	.	.	H	P	P	I	P	G	Y	E	C	P	P
Query Conservation																																																																					.	.
Alig confidence																																																																					.	.
Template Conservation
Template Sequence		R	I	D	S	E	T	T	A	N	I	G	R	F	E	G	G	T	Q	T	N	I	V	C	D	H	V	Q	I	F	A	E	A	R	S	L	I	N	E	K	X	E	A	Q	V	A	K	X	K	E	A	F	E	T	T	A	K	E	X	G	G	H	A	D	V	E	V	N	V	X	Y	P	G	F	K	F	A	D	G	D	H
Template Known Secondary structure					T	T												S		T	T	B														S	S																						T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																					.	.											.
Query SS confidence																					.	.											.
Query Sequence		N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T	E	V	V	.	.	N	Y	C	T	E	A	P	F	I	Q	.	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F	C
Query Conservation																					.	.											.
Alig confidence																					.	.											.												.
Template Conservation																																													.
Template Sequence		V	V	E	V	A	K	R	A	A	E	K	I	G	R	T	P	S	L	H	Q	S	G	G	G	S	D	A	N	V	I	A	G	H	G	I	P	T	V	N	L	A	V	G	.	Y	E	E	I	H	T	T	N	E	K	I	P	V	E	E	L	A	K	T	A	E	L	V	V	A	I	I	E	E	V	A
Template Known Secondary structure													T	T									S	S										T	T										.		B	S	T	T	S	T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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