Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 35 Aligned Residues 315 % Identity 13% Template c2pe3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:354aa long hypothetical operon protein frv; PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3 Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	G	Q	G	A	G	G	L	L	L	A	G	H	T	D	T	V	P	F	D	D
Query Conservation
Alig confidence																				.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		W	K	L	M	Q	E	I	I	E	A	P	G	V	S	G	Y	E	H	.	.	.	.	.	.	L	G	I	R	D	I	V	V	D	V	L	K	E	V	A	D	E	V	K	V	D	K	L	G	.	.	.	.	.	.	N	V	I	A	H	F	K	G	S	S	P	R	I	M	V	A	A	H	M	D	K	I	G	V	M	V
Template Known Secondary structure											S			B	T	T		G	G	.	.	.	.	.	.	G	T											T	T		S						T	T		.	.	.	.	.	.									S	S	S										B
Template Predicted Secondary structure																				.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	R	P	D	C	A	I	I	G
Query Conservation
Alig confidence										.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	H	I	D	K	D	G	Y	.	.	.	.	.	.	L	H	I	V	P	I	G	G	V	L	P	E	T	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	I	R	F	F	T	E	K	G	E	R	Y	G	V	V	G	V	L	P	D	W	D	Q	I	V	V	D	V	G	A	S	S	K	E
Template Known Secondary structure						T	T	S		.	.	.	.	.	.							S	S			G	G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T														T	T						S		S	S
Template Predicted Secondary structure										.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I	H	G	G	D
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.
Template Sequence		E	A	E	E	M	G	F	R	V	G	T	V	G	E	F	A	P	N	F	T	R	L	N	E	H	R	F	A	T	P	Y	L	D	D	R	I	C	L	Y	A	M	I	E	A	A	R	Q	L	G	D	H	E	A	D	I	Y	I	V	G	S	V	Q	E	E	V	G	L	R	G	A	R	.	.	.	.	.	.	.	V	A
Template Known Secondary structure						T	T			T	T													S	S	S					T	T																T					S	S								S	S		T	T	T	S					.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T	E	V	.
Query Conservation																																																																																	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	A	I	N	P	E	V	G	I	A	M	D	V	T	F	A	K	Q	P	H	D	K	G	K	I	V	P	E	L	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	M	D	V	G	P	N	I	N	P	K	L	R	A	F	A	D	E	V	A	K	K	Y	E	I	P	L	Q	V	E
Template Known Secondary structure								S													T	T		T	T						T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	T	T	S																T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.																	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
					328	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure		.	.	.											.	.	.
Query SS confidence		.	.	.											.	.	.
Query Sequence		.	.	.	V	N	Y	C	T	E	A	P	F	I	.	.	.	Q	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F
Query Conservation		.	.	.											.	.	.
Alig confidence		.	.	.											.	.	.													.
Template Conservation																														.
Template Sequence		P	S	P	R	P	T	G	T	D	A	N	V	M	Q	I	N	R	E	G	V	A	T	A	V	L	S	I	P	.	I	R	Y	M	H	S	Q	V	E	L	A	D	A	R	D	V	D	N	T	I	K	L	A	K	A	L	L	E	E	L
Template Known Secondary structure					S			S	S	T						T	S	T	T											.		B	S	T	T	S	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions