Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 25 Aligned Residues 344 % Identity 15% Template c2imoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:allantoate amidohydrolase; PDBTitle: crystal structure of allantoate amidohydrolase from escherichia coli2 at ph 4.6 Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		M	K	N	K	L	P	P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	.	.	.	G	Q	G	A	G	G	L	L	L
Query Conservation																																																																						.	.	.
Alig confidence																										.																																.	.	.	.	.	.							.	.	.
Template Conservation																										.																																.	.	.	.	.	.
Template Sequence		I	T	H	F	R	Q	A	I	E	E	T	L	P	W	L	S	S	F	G	A	D	X	T	R	.	L	L	Y	S	P	E	W	L	E	T	Q	Q	Q	F	K	K	R	X	A	A	S	G	L	E	T	R	F	D	E	V	G	.	.	.	.	.	.	N	L	Y	G	R	L	N	G	T	E	Y	P	Q	E	V	V	L	S
Template Known Secondary structure																		T	S	S						.		T	T	S																	T	T							T	T		.	.	.	.	.	.						B			S	S		T	T
Template Predicted Secondary structure																										.																																.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		A	G	H	T	D	T	V	P	F	D	D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	.	.	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A
Query Conservation																																																							.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	H	I	D	T	V	V	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	D	G	Q	F	G	A	L	A	A	W	L	A	I	D	W	L	K	T	Q	Y	G	A	P	L	R	T	V	E	V	V	A	X	A	E	E	E	G	S	R	F	P	Y	V	F	W	G
Template Known Secondary structure									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T																				S		S	S								S			S			S	S	S		S		T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90																						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		156	.	.	.																																										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	P	D	C	A	I	I	G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	N	I	F	G	L	A	N	P	D	D	V	N	S	F	V	D	A	X	K	A	C	G	F	T	L	P	N	A	P	L	T	P	R	Q	D	I	K	A	F	V	E	L	H	I	E	Q	G	C	V	L	E	S	N	G	Q	S	I	G	V	V	N	A	I	V	G	Q	R	R	Y	T	V	T	L	N	G	E	S	N
Template Known Secondary structure		T	T	G	G	G	T				G	G	G											T	T					S	S																		S	S	S						T		S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		195	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure							.	.																																																.
Query SS confidence							.	.																																																.
Query Sequence		H	S	S	D	P	.	.	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I	H	G	.	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L
Query Conservation							.	.																																																.
Alig confidence							.	.																											.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	G	T	T	P	X	G	Y	R	R	D	T	V	Y	A	F	S	R	I	C	H	Q	S	V	E	K	A	K	R	X	G	D	.	.	.	.	.	.	.	.	.	.	P	L	V	L	T	F	G	K	V	E	P	R	P	N	T	V	N	V	V	P	G	K	T	T	F	T	I	D	C	R	H	T	D	A	A	V	L
Template Known Secondary structure			S	S	S	S		T	T	S																								T	.	.	.	.	.	.	.	.	.	.	T												S			T	T															S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260											.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																										.	.																.
Query SS confidence																																																										.	.																.
Query Sequence		N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T	E	V	.	.	V	N	Y	C	T	E	A	P	F	I	Q	T	L	C	P	.	T	L	V	L	G	P
Query Conservation																																																										.	.																.
Alig confidence																																																										.	.																.
Template Conservation
Template Sequence		R	D	F	T	Q	Q	L	E	N	D	X	R	A	I	C	D	E	X	D	I	G	I	D	I	D	L	W	X	D	E	E	P	V	P	X	N	K	E	L	V	A	T	L	T	E	L	C	E	R	E	K	L	N	Y	R	V	X	H	S	G	A	G	H	D	A	Q	I	F	A	P	R	V	P	T	C	X	I	F	I	P
Template Known Secondary structure																			T	T																															T	T								B	S	S			T					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F	C	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	N	G	I	S	H	N	P	A	E	R	T	N	I	T	D	L	A	E	G	V	K	T	L	A	L	X	L	Y	Q	L	A	W
Template Known Secondary structure			G	G	G			S	S	T	T																								S
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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