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Job DescriptionP23908
Confidence99.87%DateThu Jan 5 11:40:32 GMT 2012
Rank53Aligned Residues231
% Identity21%Templatec2greC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:deblocking aminopeptidase; PDBTitle: crystal structure of deblocking aminopeptidase from bacillus cereus
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70. ........80.
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Query Sequence  KLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASIGQG. . AGGLLLAGHT
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Template Sequence  HTKETXELIKELVSIPSPSGNT. . . . . . . AKIINFIENYVSEWNVETKRNNKG. . . . . . ALILTVKGKNDAQHRLLTAHV
Template Known Secondary structure  TS

BTT

.......TSSSSS
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S
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   4.....10.........20..... ....30.........40......... 50.........60.........70
 
   82.... ...90.....
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Query Sequence  DTVPF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DDGRWTRDP
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Template Sequence  DTLGAXVKEIKPDGRLSLSXIGGFRWNSVEGEYCEIETSSGKTYTGTILXIEVRIDERVFSADEVRELGIEVGDFVSFDP
Template Known Secondary structure 
B

TTS
SS

GGGGTT

TTS


SS


STT

TT


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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   96...100.........110.........120.........130. ........140.........150.........160.........170...
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Query Sequence  FTLTEHDGKLYGLGTADMKGFFAFILDALRDVDVTK. . LKKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSL
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Template Sequence  RVQITESGYIKSRHL. DDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNENIPEETVE. . . . . . . . . . . . . . . . . . . . .
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TTSS

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   171........180..... ....190.........200.........210.........220........
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  QPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YLAVDXGALGDGSD
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S



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   237..240.........250
 
   254.....260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  CACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTE
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Template Sequence  EYTVSICAKDSSGP. . . . . . YHYALRKHLVELAKTNHIEYKVDIYPYYRAGF. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSTT......

TT

TT


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   253......260...... ...270.........280.........290........
 
   334.....340.........350.........360.........370.......
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Query Sequence  APFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVI
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Template Sequence  . . . . . . DVKHALIGAG. IDSSHAF. ERTHESSIAHTEALVYAYV
Template Known Secondary structure  ......SS
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SS
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   307..310...... ...320... ......330.........340..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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