 |
Job Description | P23908 | Confidence | 96.23% | Date | Thu Jan 5 11:40:32 GMT 2012 |
Rank | 85 | Aligned Residues | 70 |
% Identity | 14% | Template | c2gljR_ |
PDB info |
PDB header:hydrolase | Chain: R: PDB Molecule: |
PDBTitle: crystal structure of aminopeptidase i from clostridium2 acetobutylicum
|
Resolution | 3.20 Å |
|
 |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 330 | . | . | . | . | . | . | . | . | |
. | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | P | P | N | H | Q | L | V | E | V | V | E | K | L | L | G | A | K | T | E | V | V | . |
. |
. |
. |
. |
. |
. |
. |
N | Y | C | T | E | A | P | F | I | Q | . |
T | L | C | P | T | L | V | L | G | P | G | S | I | N | Q | A | H | Q | P | D | E | Y | L | E | T | R | F | I | K | P | T | R | E | L | I | T | Q | V | I |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |   |   |   | . |   |
|   |
|   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |
|
|
|
|
|
| . |
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
N | P | E | Y | I | A | E | L | R | R | I | L | S | K | E | S | V | N | W | Q | T | A | E | L | G | K | V | D | Q | G | G | G | G | T | I | A | Y | I | L | A | E | Y | G | M | Q | V | I | D | C | G | V | . |
A | L | L | N | X | H | A | P | W | E | I | S | S | K | A | D | I | Y | E | T | K | N | G | Y | S | A | F | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |
|
| S | S | S | S | S | S | S |
|
|
|
| T |  |  |  |  |  | T | T | T |
| B |
|
| B | B |
|
| . |  |  |  | S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
385 | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | |
. | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|