Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 42 Aligned Residues 299 % Identity 14% Template c2fvgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of endoglucanase (tm1049) from thermotoga maritima2 at 2.01 a resolution Resolution 2.01 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	.	.	G	Q	G	A	G	G	L	L	L	A	G	H	T	D	T	V	P	F	D
Query Conservation																																																													.	.
Alig confidence																		.	.	.	.	.	.	.																									.	.	.	.	.	.							.	.
Template Conservation																		.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		X	Y	L	K	E	L	S	X	X	P	G	V	S	G	D	E	.	.	.	.	.	.	.	G	K	V	R	D	F	I	K	S	K	I	E	G	L	V	D	N	L	Y	T	D	V	L	G	.	.	.	.	.	.	N	L	I	A	L	K	R	G	R	D	S	S	K	K	L	L	V	S	A	H	X	D	E	V	G	F	V
Template Known Secondary structure										S			B	T	T			.	.	.	.	.	.	.												G	G	G	S	S						T	T	S	.	.	.	.	.	.									S														B
Template Predicted Secondary structure																		.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.								.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	R	P	D	C	A	I	I
Query Conservation
Alig confidence											.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	K	I	E	K	D	G	K	.	.	.	.	.	.	V	S	F	L	P	V	G	G	V	D	P	R	I	L	P	G	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	V	K	N	L	K	G	V	I	G	Y	R	P	P	R	F	E	N	L	R	I	D	F	G	F	S	S
Template Known Secondary structure							T	T	S		.	.	.	.	.	.							S				G	G	G		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T												S	T	T						S		S	S
Template Predicted Secondary structure											.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																				.														.
Query SS confidence																				.														.
Query Sequence		G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	.	A	I	R	I	Q	G	Q	S	G	H	S	S	D	.	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I	H
Query Conservation																				.														.
Alig confidence																				.														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	E	A	K	K	Y	V	S	I	G	D	Y	V	S	F	V	S	D	Y	I	E	K	N	G	R	A	V	G	K	A	F	D	D	R	A	G	C	S	V	L	I	D	V	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	V	S	P	A	Y	D	T	Y	F	V	F	T	V	Q	E	E	S
Template Known Secondary structure							T	T			T	T													T	T					S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	V	V	E	Q	L	K	P	T	C	A	I	V	V	E	T	T	T	A	G	D	N	P	E	L	E	.	.	.	.	.	.	.	.	.	.	.	E	R	K	W	A	T	H	L	G	D	G	P	A	I	T	F	Y	H	R	G	Y	V	I	P	K	E	I	F	Q	T	I	V	D	T	A	K	N	N	D	I	P	F
Template Known Secondary structure											S												S		S	T	T		.	.	.	.	.	.	.	.	.	.	.		S	S	S	S			T	T	S						S			S	S	S																	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230												.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	N	Y	C	T	E	A	P	F	I	Q	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F
Query Conservation
Alig confidence									.	.	.	.	.	.	.											.
Template Conservation									.	.	.	.	.	.	.											.
Template Sequence		Q	X	K	R	R	T	Y	.	.	.	.	.	.	.	G	V	P	A	G	V	I	S	T	P	.	A	R	Y	I	H	S	P	N	S	I	I	D	L	N	D	Y	E	N	T	K	K	L	I	K	V	L	V	E	E	G
Template Known Secondary structure									.	.	.	.	.	.	.		S									.				S	S	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.											.
Template SS confidence
		273	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions