Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 30 Aligned Residues 328 % Identity 16% Template c2cf4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein ph0519; PDBTitle: pyrococcus horikoshii tet1 peptidase can assemble into a2 tetrahedron or a large octahedral shell Resolution 3.08 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	G	Q	G	A	G	G	L	L	L	A	G	H	T	D	T	V	P	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																.									.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.																.									.	.	.	.	.	.
Template Sequence		S	X	I	E	K	L	K	K	F	T	Q	I	P	G	I	S	G	Y	E	.	.	.	.	.	.	.	E	R	I	R	E	E	I	I	R	E	I	K	D	F	A	.	D	Y	K	V	D	A	I	G	.	.	.	.	.	.	N	L	I	V	E	L	G	E	G	E	E	R	I	L	F	X	A	H	X	D	E	I	G	L
Template Known Secondary structure													S				T	T			.	.	.	.	.	.	.										T	T	T	T	S	S	.						S	S	S	.	.	.	.	.	.							S		S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																.									.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20								.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	R	P	D	C	A	I
Query Conservation
Alig confidence												.	.	.	.	.	.																						.	.	.	.
Template Conservation												.	.	.	.	.	.																						.	.	.	.
Template Sequence		L	I	T	G	I	T	D	E	G	K	.	.	.	.	.	.	L	R	F	R	K	V	G	G	I	D	D	R	L	L	Y	G	R	H	V	N	V	.	.	.	.	V	T	E	K	G	I	L	D	G	V	I	G	A	T	P	P	H	L	S	L	E	R	D	K	S	V	I	P	W	Y	D	L	V	I	D	I	G	A	E
Template Known Secondary structure								T	T	S		.	.	.	.	.	.							S				G	G	G	T	T	T						.	.	.	.			S	S													S	S		S	S				S				T	T	S			B	B				S
Template Predicted Secondary structure												.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I	H	G
Query Conservation
Alig confidence																																																						.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		S	K	E	E	A	L	E	L	V	K	P	L	D	F	A	V	F	K	K	H	F	S	V	L	N	G	K	Y	V	S	T	R	G	L	D	D	R	F	G	V	V	A	L	I	E	A	I	K	D	L	V	D	.	.	.	.	.	.	H	E	L	E	G	K	V	I	F	A	F	T	V	Q	E	E	V	G	L	K	G	A
Template Known Secondary structure		S						T	T			T	T													S	S	S					T	T																S	S	G	G	.	.	.	.	.	.	G			S	S								S	S		T	T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T	E
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		K	F	L	A	N	H	Y	Y	P	Q	Y	A	F	A	I	D	S	F	A	C	C	S	P	L	T	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	G	K	G	P	V	I	R	A	V	D	N	S	A	I	Y	.	.	S	R	D	L	A	R	K	V	W	S	I	A	E	K	N	G	I	E	I	Q
Template Known Secondary structure					T	T	T				S	S										S	S	S	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S									S	S		B		.	.														T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.														240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		327	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		V	V	.	.	N	Y	C	T	E	A	P	F	I	Q	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F
Query Conservation				.	.
Alig confidence				.	.																						.
Template Conservation																											.
Template Sequence		I	G	V	T	G	G	G	T	D	A	S	A	F	Q	D	R	S	K	T	L	A	L	S	V	P	.	I	K	Y	L	H	S	E	V	E	T	L	H	L	N	D	L	E	K	L	V	K	L	I	E	A	L	A	F	E	L
Template Known Secondary structure						S	S			G	G	G	G	T	T	T	S	S									.			S	T	T	T	T	T													T	T	S	S	T	T	T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions