Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 33 Aligned Residues 325 % Identity 15% Template c1yloA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein sf2450; PDBTitle: crystal structure of protein of unknown function (possible2 aminopeptidase) s2589 from shigella flexneri 2a str. 2457t Resolution 2.15 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	G	Q	G	A	.	G	G	L	L	L	A	G	H	T	D	T	V	P	F	D
Query Conservation																																																																		.
Alig confidence																			.	.	.	.	.	.	.																									.	.	.	.	.	.											.															.
Template Conservation																			.	.	.	.	.	.	.																									.	.	.	.	.	.																										.
Template Sequence		L	S	L	L	K	A	L	S	E	A	D	A	I	A	S	S	E	.	.	.	.	.	.	.	Q	E	V	R	Q	I	L	L	E	E	A	A	R	L	Q	K	E	V	R	F	D	G	L	G	.	.	.	.	.	.	S	V	L	I	R	L	N	E	S	T	G	P	K	V	X	I	C	A	H	X	D	E	V	G	F	.
Template Known Secondary structure											S			B	T	T	B		.	.	.	.	.	.	.														T	T							T	T		.	.	.	.	.	.										S	S															.
Template Predicted Secondary structure																			.	.	.	.	.	.	.																									.	.	.	.	.	.																										.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	R	P	D	C	A	I	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.																								.	.	.																															.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																								.	.	.																															.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	X	V	R	S	I	S	R	E	G	A	I	D	V	L	P	V	G	N	V	R	X	A	A	.	.	.	R	Q	L	Q	P	V	R	I	T	T	R	E	E	C	K	I	P	G	L	L	D	G	D	R	Q	G	N	D	V	S	.	.	.	.	.	.	A	X	R	V	D	I	G	A	R	T	Y
Template Known Secondary structure		.	.	.	.	.	.	.							T	T									S				G	G	G	.	.	.	S	S	S								T	T														T	T				.	.	.	.	.	.							S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.																								.	.	.																															.	.	.	.	.	.
Template SS confidence
									69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I	H	G	G
Query Conservation
Alig confidence																																																					.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		D	E	V	X	Q	A	G	I	R	P	G	D	R	V	T	F	D	T	T	F	Q	V	L	P	H	Q	R	V	X	G	K	A	F	D	D	R	L	S	C	Y	L	L	V	T	L	L	R	E	L	H	D	.	.	.	.	.	.	A	E	L	P	A	E	V	W	L	V	A	S	S	S	E	E	V	G	L	R	G	G	Q
Template Known Secondary structure							T	T			T	T													T	T	T					T	T																		T	T	.	.	.	.	.	.				S	S								S			T	T	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T	E	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		T	A	T	R	A	V	S	P	D	V	A	I	V	L	D	T	A	C	W	A	K	N	F	.	.	.	.	.	.	.	.	.	D	Y	G	A	A	N	H	R	Q	I	G	N	G	P	X	L	V	L	S	D	K	S	L	I	A	.	.	P	P	K	L	T	A	W	I	E	T	V	A	A	E	I	G	V	P	L	Q	A
Template Known Secondary structure										S											S	S	T	T	.	.	.	.	.	.	.	.	.			S	T	T					T	T	S									S	S		B		.	.																T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.										230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		328				.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure			.	.	.										.	.	.
Query SS confidence			.	.	.										.	.	.
Query Sequence		V	.	.	.	N	Y	C	T	E	A	P	F	I	.	.	.	Q	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F	C
Query Conservation			.	.	.										.	.	.
Alig confidence			.	.	.										.	.	.													.
Template Conservation																														.
Template Sequence		D	X	F	S	N	G	G	T	D	G	G	A	V	H	L	T	G	T	G	V	P	T	L	V	X	G	P	A	.	T	R	H	G	H	C	A	A	S	I	A	D	C	R	D	I	L	Q	X	E	Q	L	L	S	A	L	I	Q	R	L	T
Template Known Secondary structure					S	S										T	S	T	T											.		B	S		S	S	S																						T
Template Predicted Secondary structure																														.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions