Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 34 Aligned Residues 320 % Identity 13% Template c1y0yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:frv operon protein frvx; PDBTitle: crystal structure of tetrahedral aminopeptidase from p. horikoshii in2 complex with amastatin Resolution 1.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	G	Q	G	A	G	G	L	L	L	A	G	H	T	D	T	V	P	F	D	D
Query Conservation
Alig confidence																				.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		Y	E	L	L	K	K	V	V	E	A	P	G	V	S	G	Y	E	F	.	.	.	.	.	.	L	G	I	R	D	V	V	I	E	E	I	K	D	Y	V	D	E	V	K	V	D	K	L	G	.	.	.	.	.	.	N	V	I	A	H	K	K	G	E	G	P	K	V	M	I	A	A	H	M	D	Q	I	G	L	M	V
Template Known Secondary structure											S			B	T	T		G	G	.	.	.	.	.	.	G	T										G	G	G	S	S						T	T		.	.	.	.	.	.									S	S											B
Template Predicted Secondary structure																				.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	.	R	P	D	C	A	I	I
Query Conservation																																																																										.
Alig confidence										.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation										.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	H	I	E	K	N	G	F	.	.	.	.	.	.	L	R	V	A	P	I	G	G	V	D	P	K	T	L	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	F	K	V	W	I	D	K	G	K	F	I	Y	G	V	G	A	S	A	P	D	W	D	Q	I	F	I	D	I	G	A	E	S	K
Template Known Secondary structure						T	T	S		.	.	.	.	.	.							S	S			G	G	G	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T													G	G	G						S		S	S
Template Predicted Secondary structure										.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I	H	G	G
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		E	E	A	E	D	M	G	V	K	I	G	T	V	I	T	W	D	G	R	L	E	R	L	G	K	H	R	F	V	S	I	A	F	D	D	R	I	A	V	Y	T	I	L	E	V	A	K	Q	L	K	D	A	K	A	D	V	Y	F	V	A	T	V	Q	E	E	V	G	L	R	G	A	R	.	.	.	.	.	.	.	T
Template Known Secondary structure							T	T			T	T													T	T	T					T	T																			S		S	S								S			T	T	T	S					.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K	T	E	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																											.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		S	A	F	G	I	E	P	D	Y	G	F	A	I	D	V	T	I	A	A	D	I	P	G	T	P	.	.	.	.	.	.	.	E	H	K	Q	V	T	H	L	G	K	G	T	A	I	K	I	M	D	R	S	V	I	C	.	.	.	.	H	P	T	I	V	R	W	L	E	E	L	A	K	K	H	E	I	P	Y	Q	L
Template Known Secondary structure									S													S	T	T			.	.	.	.	.	.	.	G	G	G					T	T	S									T	T				.	.	.	.															T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		328	.				330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure				.	.	.									.	.	.
Query SS confidence				.	.	.									.	.	.
Query Sequence		V	N	.	.	.	Y	C	T	E	A	P	F	I	.	.	.	Q	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F
Query Conservation				.	.	.									.	.	.
Alig confidence				.	.	.									.	.	.													.
Template Conservation																														.
Template Sequence		E	I	L	L	G	G	G	T	D	A	G	A	I	H	L	T	K	A	G	V	P	T	G	A	L	S	V	P	.	A	R	Y	I	H	S	N	T	E	V	V	D	E	R	D	V	D	A	T	V	E	L	M	T	K	A	L	E	N	I
Template Known Secondary structure					S	S				T					T	T	S	T	T											.		B	S		S	S	S																							G
Template Predicted Secondary structure																														.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions