Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 38 Aligned Residues 312 % Identity 11% Template c1vhoA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of a putative peptidase/endoglucanase Resolution 1.86 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	.	G	Q	G	A	G	G	L	L	L	A	G	H	T	D	T	V	P
Query Conservation																																																																.
Alig confidence																					.	.	.	.	.	.	.																									.	.	.	.	.	.							.
Template Conservation																					.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		E	T	G	K	L	L	X	E	L	S	N	L	D	G	P	S	G	Y	E	.	.	.	.	.	.	.	T	N	V	V	S	Y	I	K	S	V	I	E	P	F	V	D	E	A	K	T	T	R	H	G	.	.	.	.	.	.	S	L	I	G	Y	K	K	G	K	G	I	G	K	L	A	F	F	A	H	V	D	E	I	G
Template Known Secondary structure													S			B	T	T			.	.	.	.	.	.	.												G	G	G		S						T	T	S	.	.	.	.	.	.									S	S	S											B
Template Predicted Secondary structure																					.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		86	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		F	D	D	G	R	.	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	R	P	D	C
Query Conservation							.
Alig confidence							.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	V	S	K	V	E	G	Q	F	A	R	L	E	P	V	Y	A	S	K	V	R	I	Y	T	K	N	G	I	E	R	G	V	I	G	X	L	A	P	H	L	Q	D	S	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	K	V	P	T	Y	D	E	I
Template Known Secondary structure									T	T																	T	T							T	T				S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	S			T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																									.	.	.	120	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	P	A	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T	L	N	L	G	H	I
Query Conservation
Alig confidence																																							.																	.	.	.	.	.	.
Template Conservation																																							.																	.	.	.	.	.	.
Template Sequence		F	V	D	L	S	L	C	E	R	G	V	R	V	G	D	I	A	V	I	D	Q	T	A	F	E	T	N	G	K	V	V	G	K	A	L	D	N	.	R	A	S	C	G	V	L	V	K	V	L	E	F	L	K	R	.	.	.	.	.	.	Y	D	H	P	W	D	V	Y	V	V	F	S	V	Q	E	E	T	G	C	L
Template Known Secondary structure					G	G	G	S	S	S				T	T													T	T					T	T				.															T	T	.	.	.	.	.	.				S	S									T	T	S	S	S
Template Predicted Secondary structure																																							.																	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E	K	L	L	G	A	K
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	T	G	A	Y	E	I	N	P	D	A	A	I	V	X	D	V	T	F	A	S	E	P	P	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	I	E	L	G	K	G	P	V	I	G	L	G	P	V	V	D	R	N	L	V	Q	K	I	I	E	I	A	K	K	H	N	V	S
Template Known Secondary structure						T	T						S													T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S							S	T	T	S															T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		325	.	.	.			.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure						.	.											.
Query SS confidence						.	.											.
Query Sequence		T	E	V	V	.	.	N	Y	C	T	E	A	P	F	I	Q	.	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F
Query Conservation						.	.											.
Alig confidence						.	.											.												.
Template Conservation																														.
Template Sequence		L	Q	E	E	A	V	G	G	R	T	D	F	V	Q	L	V	R	N	G	V	R	T	S	L	I	S	I	P	.	L	K	Y	X	H	T	P	V	E	X	V	D	P	R	D	V	E	E	L	A	R	L	L	S	L	V	A	V	E	L
Template Known Secondary structure						S	S					T	T						T	T										.		B	S	T	T	S	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions