Job Description P23908 Confidence 100.00% Date Thu Jan 5 11:40:32 GMT 2012 Rank 29 Aligned Residues 338 % Identity 12% Template c1vheA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:aminopeptidase/glucanase homolog; PDBTitle: crystal structure of a aminopeptidase/glucanase homolog Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		K	L	P	P	F	I	E	I	Y	R	A	L	I	A	T	P	S	I	S	A	T	E	E	A	L	D	Q	S	N	A	D	L	I	T	L	L	A	D	W	F	K	D	L	G	F	N	V	E	V	Q	P	V	P	G	T	R	N	K	F	N	M	L	A	S	I	.	.	G	Q	G	A	G	G	L	L	L	A	G	H	T
Query Conservation																																																																			.	.
Alig confidence																								.	.	.	.	.	.	.																									.	.	.	.	.	.							.	.
Template Conservation																								.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		K	L	D	E	T	L	T	X	L	K	D	L	T	D	A	K	G	I	P	G	N	E	.	.	.	.	.	.	.	R	E	V	R	Q	V	X	K	S	Y	I	E	P	F	A	D	E	V	T	T	D	R	L	G	.	.	.	.	.	.	S	L	I	A	K	K	T	G	A	E	N	G	P	K	I	X	I	A	G	H	L
Template Known Secondary structure																S				T	T			.	.	.	.	.	.	.												G	G	G		S						T	T		.	.	.	.	.	.								S	S	T	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		D	T	V	P	F	D	D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	.	.	K	L	K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A
Query Conservation																																																			.	.
Alig confidence																		.	.	.	.	.	.																												.	.																							.	.	.	.
Template Conservation																		.	.	.	.	.	.																																																				.	.	.	.
Template Sequence		D	E	V	G	F	X	V	T	Q	I	T	D	K	G	F	I	.	.	.	.	.	.	R	F	Q	T	V	G	G	W	W	A	Q	V	X	L	A	Q	R	V	T	I	V	T	K	K	G	E	I	T	G	V	I	G	S	K	P	P	H	I	L	S	P	E	A	R	K	K	S	V	E	I	K	.	.	.	.	D	X	F
Template Known Secondary structure													T	T	S			.	.	.	.	.	.						S				G	G	G	T	T	T								T	T												G	G	G	S		T	T	T	T	T	S				G	G	.	.	.	.	G
Template Predicted Secondary structure																		.	.	.	.	.	.																																																				.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	R	P	D	C	A	I	I	G	E	P	T	S	L	Q	P	V	R	A	H	K	G	H	I	S	N	A	I	R	I	Q	G	Q	S	G	H	S	S	D	P	A	.	R	G	V	N	A	I	E	L	M	H	D	A	I	G	H	I	L	Q	L	R	D	N	L	K	E	R	Y	H	Y	E	A	F	T	V	P	Y	P	T
Query Conservation																																											.
Alig confidence																																											.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	I	G	A	S	S	R	E	E	A	L	E	W	G	V	L	P	G	D	X	I	V	P	H	F	E	F	T	V	X	N	N	E	K	F	L	L	A	K	A	W	D	N	R	I	G	C	A	I	A	I	D	V	L	R	N	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	N	T	D	H	P	N	I	V	Y
Template Known Secondary structure					S		S	S							T	T			T	T													S	S	T	T					T	T																			.	.	.	.	.	.	.	.	.	.	.	.	T	S			S	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.													.	200	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	G	H	I	H	G	G	D	A	S	N	R	I	C	A	C	C	E	L	H	M	D	I	R	P	L	P	G	M	T	L	N	E	L	N	G	L	L	N	D	A	L	A	P	V	S	E	R	W	P	G	R	L	T	V	D	E	L	H	P	P	I	P	G	Y	E	C	P	P	N	H	Q	L	V	E	V	V	E
Query Conservation
Alig confidence																																																													.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		G	V	G	T	V	Q	E	E	V	G	L	R	G	A	K	T	A	A	H	T	I	Q	P	D	I	A	F	G	V	D	V	G	I	A	G	D	T	P	G	I	S	E	K	E	A	Q	S	K	X	G	K	G	P	Q	I	I	V	Y	D	.	.	.	.	A	S	X	V	S	H	K	G	L	R	D	A	V	V	A	T	A
Template Known Secondary structure						S			T	T	T	S													S													S	T	T			T	T	T					T	T	S									.	.	.	.	T	T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		319	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure												.	.	.										.	.	.
Query SS confidence												.	.	.										.	.	.
Query Sequence		K	L	L	G	A	K	T	E	V	V	.	.	.	N	Y	C	T	E	A	P	F	I	.	.	.	Q	T	L	C	P	T	L	V	L	G	P	G	S	I	N	Q	A	H	Q	P	D	E	Y	L	E	T	R	F	I	K	P	T	R	E	L	I	T	Q	V	I	H	H	F	C
Query Conservation												.	.	.										.	.	.
Alig confidence												.	.	.										.	.	.													.
Template Conservation																																							.
Template Sequence		E	E	A	G	I	P	Y	Q	F	D	A	I	A	G	G	G	T	D	S	G	A	I	H	L	T	A	N	G	V	P	A	L	S	I	T	I	A	.	T	R	Y	I	H	T	H	A	A	X	L	H	R	D	D	Y	E	N	A	V	K	L	I	T	E	V	I	K	K	L	D
Template Known Secondary structure					T									T	T				T					T	T	S	T	T											.		B	S	T	T	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions