Job Description P23908 Confidence 98.21% Date Thu Jan 5 11:40:32 GMT 2012 Rank 78 Aligned Residues 78 % Identity 14% Template c1cx8F_ PDB info PDB header:metal transport Chain: F: PDB Molecule:transferrin receptor protein; PDBTitle: crytal structure of the ectodomain of human transferrin receptor Resolution 3.20 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.
Predicted Secondary structure															.	.	.																																																									.	.	.	.	.	.
Query SS confidence															.	.	.																																																									.	.	.	.	.	.
Query Sequence		F	N	M	L	A	S	I	G	Q	G	A	G	G	.	.	.	L	L	L	A	G	H	T	D	T	V	P	F	D	D	G	R	W	T	R	D	P	F	T	L	T	E	H	D	G	K	L	Y	G	L	G	T	A	D	M	K	G	F	F	A	F	I	L	D	A	L	R	D	V	D	V	T	.	.	.	.	.	.	K	L
Query Conservation															.	.	.																																																									.	.	.	.	.	.
Alig confidence															.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	I	F	G	V	I	K	G	F	V	E	P	D	H	Y	V	V	V	G	A	Q	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	P	G	A	A	K	S	G	V	G	T	A	L	L	L	K	L	A	Q	M	F	S	D	M	V	L	K	D	G	F	Q	P
Template Known Secondary structure											S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			T	T	T	T																				T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.																							.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	P	L	Y	I	L	A	T	A	D	E	E	T	S	M	A	G	A	R	Y	F	A	E	T	T	A	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	S	I	I	F	A	S	W	S	A	G	D	F	G	S	V	G	A	T	E	W	L	E	G	Y	L	S	S
Template Known Secondary structure		S							B			S	G	G	G	T	S								G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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