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Job DescriptionP23908
Confidence100.00%DateThu Jan 5 11:40:32 GMT 2012
Rank5Aligned Residues361
% Identity23%Templatec1cg2D_
PDB info PDB header:metallocarboxypeptidaseChain: D: PDB Molecule:carboxypeptidase g2; PDBTitle: carboxypeptidase g2
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60........ .70.........80
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Query Sequence  KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASI. GQGAGGLLLAGH
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Template Sequence  TDEQPAVIKTLEKLVNIETGTGDAEGI. . . . AAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKNLLLMSH
Template Known Secondary structure  TS

BTT
....TT

STT

S
SS


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   37..40.........50.........60... ......70.........80.........90.........100.........110..
 
   81........90.........100.........110.........120.........130 .........140.........150........
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Query Sequence  TDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILDALRDVDVT. . KLKKPLYILATADEETSMAGARYFAETT
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Template Sequence  MDTVYLKG. ILAKAPFR. . VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEE
Template Known Secondary structure 

BS

TT.S

..TT
TTTTTTTT


SSS
GGGTTTTT
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   113......120 ........ .130.........140.........150.........160.........170.........180.........
 
   159160.........170.... .....180.........190...... ...200.........210.........220.........230....
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Query Sequence  ALRPDCAIIGEPTSLQ. . . PVRAHKGHISNAIRIQGQSGHS. SDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTV
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Template Sequence  AKLADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMN. . . . . . . . . . . IDDKA
Template Known Secondary structure 
S


TTS
S

B
TTS
GGGSB
GG...........G
BGG
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   190.........200.........210.........220.........230.........240.........250... .....
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  PYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLV
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Template Sequence  KNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ. KKLPEADVKVIVTRGRPAFNAGEGGKKLV
Template Known Secondary structure  GT
SSTT
SSSTS.
SSTT

S


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   259260.........270.........280.........290.........300........ .310.........320.........330.......
 
   315....320.... .....330........ .340.... .....350.........360.........370.........380.
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Query Sequence  EVVEKLLGAK. . . . . . TEVVNYCTEAPFIQ. TLCPTL. VLGPGSINQAHQPDEYLETRFIKPTRELITQVIHHFC
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Template Sequence  DKAVAYYKEAGGTLGVEERTGGGTDAAYAALSGKPVIESLGLPGFGYHSDKAEYVDISAIPRRLYMAARLIMDLG
Template Known Secondary structure  TT


S
BS


TGGG
S



S

TTSSS

GGG
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   338.340.........350.........360.........370.........380.........390.........400.........410..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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