 |
Job Description | P31825 | Confidence | 99.29% | Date | Wed Jan 25 15:20:49 GMT 2012 |
Rank | 262 | Aligned Residues | 100 |
% Identity | 22% | Template | d1yuba_ |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| rRNA adenine dimethylase-like
|
Resolution | UNK |
|
 |
  |   |
20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | H | D | R | C | . |
A | M | K | V | G | T | D | G | I | L | L | G | A | . |
. |
. |
W | A | P | V | A | G | V | K | R | C | L | D | I | G | A | G | S | G | L | L | A | L | M | L | A | Q | R | T | D | D | S | V | M | I | D | A | V | E | L | E | S | E | A | A | A | Q | A | Q | E | N | I | N | Q | S | P | W | A |
Query Conservation |   |
  |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |
|
|   |   | . | . | . |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   | . | . | . |   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . |
Template Sequence |   |
M | N | K | N | I | K | Y | S | Q | N | F | L | T | S | E | K | V | L | N | Q | I | I | K | Q | L | N | L | K | E | T | D | T | V | Y | E | I | G | T | G | K | G | H | L | T | T | K | L | A | K | I | S | . |
. |
. |
K | Q | V | T | S | I | E | L | D | S | H | L | F | N | L | S | S | E | K | L | K | L | N | T | . |
. |
Template Known Secondary structure |   |
|
|
|
|
|
| S |
|
|
| B |
|
|
| T | T | T |  |  |  |  |  |  |  |
|
|
|
| S | S |  |  |  |  |  |
| S |
|
|
| S | S |
| S |  |  |  |  |  |  | S | . | . | . | S |  |  |  |  | S | S | S | S |
| S | S | S | S | S | S | S |
| T | T | T | T |
| S | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | I | N | V | H | T | A | D | I | Q | Q | W | I | T | Q | Q | T | V | R | F | D | L | I | I | S | N | P | P | Y | Y |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   | . |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
Template Sequence |   |
. |
R | V | T | L | I | H | Q | D | I | L | Q | F | Q | F | P | . |
N | K | Q | R | Y | K | I | V | G | N | I | P | Y | H |
Template Known Secondary structure |   |
. |  |  |  |  |
|
| S |
|
| T | T | T | T |
|
| . |
| S | S |  |  |  |  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
. |
|  |  |  |  |  |
|
|  |  |
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|