Job Description P31825 Confidence 48.98% Date Wed Jan 25 15:20:49 GMT 2012 Rank 484 Aligned Residues 138 % Identity 17% Template c3pwzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida Resolution 1.71 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		F	V	A	H	D	R	C	A	M	K	V	G	T	D	.	.	.	.	.	G	I	L	L	G	A	W	A	P	V	A	G	V	K	R	C	L	D	I	G	A	G	S	G	L	L	A	L	M	L	A	Q	R	T	D	D	S	V	M	I	D	A	V	E	L	E	S	E	A	A	A	Q	A	Q	E	N	I	N	Q	S	P
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		L	K	F	E	D	G	R	I	V	A	E	N	F	D	G	I	G	L	L	R	D	I	E	E	N	L	G	E	P	L	R	N	R	R	V	L	L	L	G	A	G	G	A	V	R	G	A	L	L	P	F	L	Q	A	G	P	S	E	L	V	I	A	N	R	D	M	A	K	A	L	A	L	R	N	E	L	D	H	S	R
Template Known Secondary structure						T	T																		T	T	S					T	T	S								S													T			S							S															T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	E	R	I	N	V	H	T	A	D	I	Q	Q	W	I	T	Q	Q	T	V	R	F	D	L	I	I	S	N	P	P	Y	Y	Q	Q	G	V	E	C	S	T	P	Q	R	E	Q	A	R	Y	T	T	T	L	D	H	P	S	L	L	T	C	A	A	E	C	I	T	E	E	G	F	F	C	V	V	L	P	E	Q	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	.	.	.	.	.	.	.	.	.	I	S	R	Y	E	A	L	E	G	Q	S	F	D	I	V	V	N	A	T	S	A	S	L	T	A	D	L	P	P	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	G	E	A	A	L	A	Y	E	L	A	Y	G	K	G
Template Known Secondary structure				.	.	.	.	.	.	.	.	.				S	G	G	G	T	T				S						S	S	G	G	G	G	T							G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T		S					S	S		S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	G	F	T	E	L	A	L	S	M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	P	F	L	R	L	A	R	E	Q	G
Template Known Secondary structure		S											S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions